RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB75017", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJEB75017 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2685374 2685374 PRJEB75017_P_NODE_10503_length_284_cov_1.175355_g10374_i0 PRJEB75017 10503 284 1.175355 3.3380082 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 60.8 2.23e-8   NR MCA9326149.1 2026720 g10374 i0 45.2 0.654929577464789 62 34 65.5 0 2 187 170 231 MCA9326149.1 DUF21 domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 186 60.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
26907592 26907592 PRJEB75017_P_NODE_14922_length_250_cov_1.706215_g14793_i0 PRJEB75017 14922 250 1.706215 4.2655375 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 54.7 2.54e-6   NR RKW02782.1 1917697 g14793 i0 64.9 0.888 37 13 44.4 0 1 111 589 625 RKW02782.1 MAG: hypothetical protein D8B38_02570 [Candidatus Saccharimonas sp.] diamond 222 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;