RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJEB75017", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJEB75017 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30666026 30666026 PRJEB75017_P_NODE_9173_length_299_cov_1.230088_g9044_i0 PRJEB75017 9173 299 1.230088 3.67796312 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 52.8 2.1e-5   NR RKU30739.1 2026781 g9044 i0 31.2 1.83612040133779 93 42 84.3 3 32 283 349 428 RKU30739.1 MAG: hypothetical protein C6497_03410 [Candidatus Poribacteria bacterium] diamond 549 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32303463 32303463 PRJEB75017_P_NODE_18859_length_227_cov_2.480519_g18730_i0 PRJEB75017 18859 227 2.480519 5.63077813 Bacteria 2 Bacteria Bacteria 51.2 1.43e-5   NR MCZ6679473.1 2026781 g18730 i0 40.7 1.4273127753304 54 32 71.4 0 164 3 36 89 MCZ6679473.1 redoxin family protein [Candidatus Poribacteria bacterium] diamond 324 51.6 0.992248062015504 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;