RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB75017", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJEB75017 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26685832 26685832 PRJEB75017_P_NODE_11281_length_276_cov_1.980296_g11152_i0 PRJEB75017 11281 276 1.980296 5.46561696 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 53.1 1.2e-5   NR HEY2107207.1 2785449 g11152 i0 62.5 0.869565217391304 40 14 43.5 1 271 152 163 201 HEY2107207.1 protein kinase [Candidatus Binataceae bacterium] diamond 240 53.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
30223679 30223679 PRJEB75017_P_NODE_9552_length_294_cov_1.009050_g9423_i0 PRJEB75017 9552 294 1.00905 2.966607 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 43.1 0.0496   NR HZP43321.1 2838779 g9423 i0 45.8 0.602040816326531 59 30 58.2 1 68 238 689 747 HZP43321.1 thrombospondin type 3 repeat-containing protein [Candidatus Binatia bacterium] diamond 177 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30634289 30634289 PRJEB75017_P_NODE_15573_length_249_cov_0.886364_g15444_i0 PRJEB75017 15573 249 0.886364 2.20704636 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 47.8 2.98e-4   NR MET0151083.1 2838779 g15444 i0 42.9 1.65060240963855 63 31 74.7 2 1 186 35 93 MET0151083.1 adenylate/guanylate cyclase domain-containing protein [Candidatus Binatia bacterium] diamond 411 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;