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contig_metadata

24 rows where bioproject = "PRJEB7366", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 24 ✖

tax_phylum 1

  • Myxococcota · 24 ✖

tax_kingdom 1

bioproject 1

  • PRJEB7366 · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5237789 5237789 PRJEB7366_P_NODE_15425_length_199_cov_0.975610_g14991_i0 PRJEB7366 15425 199 0.97561 1.9414639 Minicystis rosea 888845 Bacteria Bacteria 217 5.79e-52   NTclustered gi|1127353251|gb|CP016211.1| 888845 g14991 i0 87.179 177 195 20 96 4 1 191 768945 769138 Minicystis rosea strain DSM 24000 chromosome, complete genome blastn 35223 217 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Minicystis Minicystis rosea
14163648 14163648 PRJEB7366_P_NODE_16192_length_193_cov_1.265823_g15758_i0 PRJEB7366 16192 193 1.265823 2.44303839 Polyangiaceae 49 Bacteria Bacteria 114 1.26e-30   NR HMY20693.1 57 g15758 i0 84.1 2.92227979274611 63 10 97.9 0 3 191 5 67 HMY20693.1 peptidylprolyl isomerase [Polyangium sp.] diamond 564 114 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium sp.
16298178 16298178 PRJEB7366_P_NODE_15773_length_196_cov_1.559006_g15339_i0 PRJEB7366 15773 196 1.559006 3.05565176 Polyangiales 3031712 Bacteria Bacteria 252 1.56e-62   NTclustered gi|1338588479|gb|CP012673.1| 56 g15339 i0 90.155 300.811224489796 193 19 100 0 4 196 3451848 3451656 Sorangium cellulosum strain So ce26 chromosome, complete genome blastn 58959 254 0.992125984251969 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
23087090 23087090 PRJEB7366_P_NODE_8959_length_282_cov_1.457490_g8525_i0 PRJEB7366 8959 282 1.45749 4.1101218 Pseudomonadati 3379134 Bacteria Bacteria 160 4.72e-45   NR TMA69970.1 2026735 g8525 i0 84.8 60.6808510638298 92 14 97.9 0 5 280 314 405 TMA69970.1 MAG: NADP-dependent isocitrate dehydrogenase [Deltaproteobacteria bacterium] diamond 17112 161 0.993788819875776 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
26590640 26590640 PRJEB7366_P_NODE_1561_length_790_cov_1.692715_g1249_i0 PRJEB7366 1561 790 1.692715 13.3724485 Polyangia bacterium 3058050 Bacteria Bacteria 58.9 6.18e-6   NR HZL16340.1 3058050 g1249 i0 42.5 0.854430379746835 80 41 30.4 3 733 494 83 157 HZL16340.1 right-handed parallel beta-helix repeat-containing protein [Polyangia bacterium] diamond 675 58.9 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
26685825 26685825 PRJEB7366_P_NODE_24841_length_150_cov_1.243478_g24407_i0 PRJEB7366 24841 150 1.243478 1.865217 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 53.1 2.17e-6   NR MBM4353825.1 2026735 g24407 i0 62.5 2.36 40 11 80 1 5 124 922 957 MBM4353825.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 354 53.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
26907558 26907558 PRJEB7366_P_NODE_11062_length_246_cov_1.587678_g10628_i0 PRJEB7366 11062 246 1.587678 3.90568788 Myxococcales bacterium 2026763 Bacteria Bacteria 94 3.66e-20   NR MFT3924888.1 2026763 g10628 i0 55.6 1.98780487804878 81 36 98.8 0 243 1 494 574 MFT3924888.1 acyl-CoA dehydrogenase C-terminal domain-containing protein [Myxococcales bacterium] diamond 489 94 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27445261 27445261 PRJEB7366_P_NODE_14243_length_209_cov_1.609195_g13809_i0 PRJEB7366 14243 209 1.609195 3.36321755 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 93.6 1.48e-20   NR MBW2616657.1 2026735 g13809 i0 65.2 1.98086124401914 69 24 99 0 207 1 162 230 MBW2616657.1 thiolase family protein [Deltaproteobacteria bacterium] diamond 414 93.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27571224 27571224 PRJEB7366_P_NODE_15784_length_196_cov_1.490683_g15350_i0 PRJEB7366 15784 196 1.490683 2.92173868 Enhygromyxa salina 215803 Bacteria Bacteria 48.9 1.32e-4   NR WP_181233537.1 215803 g15350 i0 36.4 3.01530612244898 66 39 99.5 2 195 1 197 260 WP_181233537.1 Rieske 2Fe-2S domain-containing protein [Enhygromyxa salina] diamond 591 48.9 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Enhygromyxa Enhygromyxa salina
27627372 27627372 PRJEB7366_P_NODE_24904_length_150_cov_1.043478_g24470_i0 PRJEB7366 24904 150 1.043478 1.565217 Bacteria 2 Bacteria Bacteria 52 4.66e-7   NR PRQ00564.1 215803 g24470 i0 43.5 6.16 46 25 92 1 13 150 24 68 PRQ00564.1 Cysteine-rich secretory protein family protein [Enhygromyxa salina] diamond 924 52.4 0.99236641221374 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Enhygromyxa Enhygromyxa salina
27981781 27981781 PRJEB7366_P_NODE_15045_length_202_cov_1.622754_g14611_i0 PRJEB7366 15045 202 1.622754 3.27796308 Myxococcota bacterium 2818507 Bacteria Bacteria 43.9 0.00853   NR MCK6509442.1 2818507 g14611 i0 52.2 0.683168316831683 46 17 66.8 3 139 5 240 281 MCK6509442.1 hypothetical protein [Myxococcota bacterium] diamond 138 43.9 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28258535 28258535 PRJEB7366_P_NODE_5506_length_383_cov_2.836207_g5073_i0 PRJEB7366 5506 383 2.836207 10.86267281 Myxococcia 32015 Bacteria Bacteria 52 9.69e-5   NR NMB76287.1 2026763 g5073 i0 34.7 4.50391644908616 121 48 79.9 8 368 63 96 204 NMB76287.1 hypothetical protein [Myxococcales bacterium] diamond 1725 52.4 0.99236641221374 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28518584 28518584 PRJEB7366_P_NODE_5527_length_382_cov_1.945245_g5094_i0 PRJEB7366 5527 382 1.945245 7.4308359 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 47 0.0051   NR MBI5526680.1 2026735 g5094 i0 33 0.714659685863874 91 55 71.5 3 52 324 242 326 MBI5526680.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 273 47 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29213361 29213361 PRJEB7366_P_NODE_4429_length_440_cov_1.733333_g4000_i0 PRJEB7366 4429 440 1.733333 7.6266652 Archangium sp. Cb G35 1920190 Bacteria Bacteria 46.2 0.0174   NR WP_073567540.1 1920190 g4000 i0 44.3 0.415909090909091 61 32 41.6 1 440 258 126 184 WP_073567540.1 GON domain-containing protein [Archangium sp. Cb G35] diamond 183 46.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp. Cb G35
29907935 29907935 PRJEB7366_P_NODE_15271_length_200_cov_1.345455_g14837_i0 PRJEB7366 15271 200 1.345455 2.69091 Myxococcus sp. RHSTA-1-4 2874601 Bacteria Bacteria 55.5 2.21e-8   NR WP_223760390.1 2874601 g14837 i0 63.3 0.9 30 11 45 0 9 98 10 39 WP_223760390.1 hypothetical protein [Myxococcus sp. RHSTA-1-4] diamond 180 55.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Myxococcus Myxococcus sp. RHSTA-1-4
30563747 30563747 PRJEB7366_P_NODE_11053_length_246_cov_1.838863_g10619_i0 PRJEB7366 11053 246 1.838863 4.52360298 Polyangium 55 Bacteria Bacteria 43.1 0.0279   NR HMY17848.1 57 g10619 i0 37.1 2.46341463414634 62 37 73.2 1 59 238 110 171 HMY17848.1 choice-of-anchor L domain-containing protein [Polyangium sp.] diamond 606 43.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium sp.
30855561 30855561 PRJEB7366_P_NODE_12914_length_223_cov_1.063830_g12480_i0 PRJEB7366 12914 223 1.06383 2.3723409 Sandaracinus sp. 2024858 Bacteria Bacteria 57.4 1.39e-7   NR MCB9612965.1 2024858 g12480 i0 51.1 1.62780269058296 45 22 60.5 0 135 1 54 98 MCB9612965.1 CAP domain-containing protein [Sandaracinus sp.] diamond 363 57.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus sp.
31101019 31101019 PRJEB7366_P_NODE_8875_length_283_cov_3.645161_g8441_i0 PRJEB7366 8875 283 3.645161 10.31580563 Bacteria 2 Bacteria Bacteria 137 2.05e-36   NR MCP4679037.1 2026735 g8441 i0 65.6 4.92932862190813 93 32 98.6 0 282 4 206 298 MCP4679037.1 GTPase [Deltaproteobacteria bacterium] diamond 1395 137 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31139598 31139598 PRJEB7366_P_NODE_8935_length_282_cov_3.599190_g8501_i0 PRJEB7366 8935 282 3.59919 10.1497158 Polyangium aurulentum 2567896 Bacteria Bacteria 43.9 0.022   NR WP_136921029.1 2567896 g8501 i0 38.2 0.723404255319149 68 42 72.3 0 54 257 327 394 WP_136921029.1 YeeE/YedE family protein [Polyangium aurulentum] diamond 204 43.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium aurulentum
31614340 31614340 PRJEB7366_P_NODE_2656_length_589_cov_2.523466_g2261_i0 PRJEB7366 2656 589 2.523466 14.86321474 Polyangiaceae bacterium 2268199 Bacteria Bacteria 65.9 1.02e-8   NR MCU0654460.1 2268199 g2261 i0 34.3 1.6553480475382 137 72 67.7 8 148 546 183 305 MCU0654460.1 hypothetical protein [Polyangiaceae bacterium] diamond 975 65.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31709265 31709265 PRJEB7366_P_NODE_12277_length_230_cov_1.887179_g11843_i0 PRJEB7366 12277 230 1.887179 4.3405117 Polyangiaceae bacterium 2268199 Bacteria Bacteria 63.5 3.29e-10   NR HEX4475590.1 2268199 g11843 i0 68.6 0.939130434782609 35 11 45.7 0 119 15 151 185 HEX4475590.1 hypothetical protein [Polyangiaceae bacterium] diamond 216 63.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31891796 31891796 PRJEB7366_P_NODE_19657_length_172_cov_1.167883_g19223_i0 PRJEB7366 19657 172 1.167883 2.00875876 root 1 Root_unresolved Root_unresolved 105 1.41e-24   NR MBN8538494.1 2026735 g19223 i0 80.4 3.90697674418605 56 11 97.7 0 3 170 92 147 MBN8538494.1 phosphoenolpyruvate carboxykinase (GTP) [Deltaproteobacteria bacterium] diamond 672 105 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32461471 32461471 PRJEB7366_P_NODE_18519_length_178_cov_1.167832_g18085_i0 PRJEB7366 18519 178 1.167832 2.07874096 Pseudomonadati 3379134 Bacteria Bacteria 75.9 3.28e-14   NR GMV42537.1 2026763 g18085 i0 52.5 1.97191011235955 59 28 99.4 0 2 178 398 456 GMV42537.1 MAG: hypothetical protein AMXMBFR64_42530 [Myxococcales bacterium] diamond 351 76.3 0.99475753604194 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32878348 32878348 PRJEB7366_P_NODE_720_length_1131_cov_2.185219_g528_i0 PRJEB7366 720 1131 2.185219 24.71482689 Myxococcota bacterium 2818507 Bacteria Bacteria 48.9 0.0249   NR MCK6508598.1 2818507 g528 i0 29.8 0.302387267904509 114 56 27.9 4 141 455 187 285 MCK6508598.1 hypothetical protein [Myxococcota bacterium] diamond 342 48.9 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;