RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB7366" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB7366 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29528981 29528981 PRJEB7366_P_NODE_9590_length_270_cov_1.519149_g9156_i0 PRJEB7366 9590 270 1.519149 4.1017023 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 102 7.539999999999999e-23   NR MFC1703536.1 2035772 g9156 i0 58 2.93333333333333 88 37 97.8 0 3 266 1221 1308 MFC1703536.1 proline dehydrogenase family protein [Candidatus Omnitrophota bacterium] diamond 792 102 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29686394 29686394 PRJEB7366_P_NODE_10310_length_257_cov_2.103604_g9876_i0 PRJEB7366 10310 257 2.103604 5.40626228 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 93.2 8.13e-20   NR MFH1245282.1 2035772 g9876 i0 54.1 0.992217898832685 85 39 99.2 0 256 2 1623 1707 MFH1245282.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 255 93.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32500420 32500420 PRJEB7366_P_NODE_17619_length_183_cov_1.851351_g17185_i0 PRJEB7366 17619 183 1.851351 3.38797233 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 62.8 1.49e-9   NR MFC1703536.1 2035772 g17185 i0 49.1 3 55 28 90.2 0 180 16 1135 1189 MFC1703536.1 proline dehydrogenase family protein [Candidatus Omnitrophota bacterium] diamond 549 62.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;