RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB7366" and tax_kingdom = "Thermotogati"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJEB7366 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6513334 6513334 PRJEB7366_P_NODE_13306_length_218_cov_2.251366_g12872_i0 PRJEB7366 13306 218 2.251366 4.90797788 Deinococcus grandis 57498 Bacteria Bacteria 403 4.62e-108   NTclustered gi|1751871007|dbj|AP021849.1| 57498 g12872 i0 100 313.628440366972 218 0 100 0 1 218 73666 73449 Deinococcus grandis ATCC 43672 DNA, complete genome blastn 68371 403 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus grandis
26615229 26615229 PRJEB7366_P_NODE_17921_length_181_cov_1.801370_g17487_i0 PRJEB7366 17921 181 1.80137 3.2604797 root 1 Root_unresolved Root_unresolved 87.8 1.49e-20   NR WP_290644878.1 1955248 g17487 i0 67.8 9.76243093922652 59 19 97.8 0 179 3 6 64 WP_290644878.1 glycine cleavage system protein GcvH [Kosmotoga sp.] diamond 1767 87.8 1 Bacteria   Thermotogati Thermotogota Thermotogae Kosmotogales Kosmotogaceae Kosmotoga Kosmotoga sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;