RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB7366", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB7366 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26781053 26781053 PRJEB7366_P_NODE_17681_length_183_cov_1.081081_g17247_i0 PRJEB7366 17681 183 1.081081 1.97837823 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 45.4 0.0018600000000000001   NR KNE69032.1 578462 g17247 i0 47.9 2.36065573770492 48 24 78.7 1 165 22 76 122 KNE69032.1 hypothetical protein AMAG_13907 [Allomyces macrogynus ATCC 38327] diamond 432 45.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
28360466 28360466 PRJEB7366_P_NODE_11226_length_244_cov_1.339713_g10792_i0 PRJEB7366 11226 244 1.339713 3.26889972 Catenaria anguillulae PL171 765915 Fungi Fungi 50.4 7.03e-5   NR ORZ38897.1 765915 g10792 i0 35.4 1.97950819672131 79 47 92.2 1 240 16 274 352 ORZ38897.1 thioredoxin-like protein [Catenaria anguillulae PL171] diamond 483 50.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
29939529 29939529 PRJEB7366_P_NODE_16071_length_194_cov_1.301887_g15637_i0 PRJEB7366 16071 194 1.301887 2.52566078 Coelomomyces lativittatus 945690 Fungi Fungi 90.5 2.0200000000000003e-21   NR KAJ1509529.1 945690 g15637 i0 65.1 3.75773195876289 63 22 97.4 0 4 192 29 91 KAJ1509529.1 60S ribosomal protein L32 [Coelomomyces lativittatus] diamond 729 90.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;