RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB7366", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJEB7366 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3546111 3546111 PRJEB7366_P_NODE_7983_length_304_cov_1.070632_g7549_i0 PRJEB7366 7983 304 1.070632 3.25472128 Ureaplasma 2129 Bacteria Bacteria 52.8 0.028   NTclustered gi|1493548740|dbj|AP018561.1| 38504 g7549 i0 100 1.01315789473684 28 0 9 0 213 240 669733 669760 Ureaplasma parvum serovar 3 OMC-P162 DNA, complete genome blastn 308 52.8 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Mycoplasmoidaceae Ureaplasma Ureaplasma parvum
16298169 16298169 PRJEB7366_P_NODE_11973_length_234_cov_1.155779_g11539_i0 PRJEB7366 11973 234 1.155779 2.70452286 Bacillati 1783272 Bacteria Bacteria 63.9 9.68e-6   NTclustered gi|1285322367|gb|CP024962.1| 74700 g11539 i0 95 0.371794871794872 40 2 17 0 161 200 404090 404129 Entomoplasma freundtii strain BARC 318 chromosome, complete genome blastn 87 63.9 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Entomoplasmataceae Entomoplasma Entomoplasma freundtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;