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contig_metadata

31 rows where bioproject = "PRJEB7366" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 31 ✖

bioproject 1

  • PRJEB7366 · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
135247 135247 PRJEB7366_P_NODE_15401_length_199_cov_1.219512_g14967_i0 PRJEB7366 15401 199 1.219512 2.42682888 Chlorellaceae 35461 Plants Plants 86.3 9.83e-18   NR WPT11371.1 1470871 g14967 i0 70.8 6.87437185929648 65 18 98 1 5 199 24 87 WPT11371.1 Phospholipase B-like 1 [Picochlorum sp. SENEW3] diamond 1368 86.7 0.995386389850058 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. SENEW3
1409851 1409851 PRJEB7366_P_NODE_24862_length_150_cov_1.043478_g24428_i0 PRJEB7366 24862 150 1.043478 1.565217 Chlamydomonas reinhardtii 3055 Plants Plants 67.8 1.49e-11   NR XP_042921031.1 3055 g24428 i0 66.7 4.54 48 15 94 1 5 145 371 418 XP_042921031.1 uncharacterized protein CHLRE_09g388850v5 [Chlamydomonas reinhardtii] diamond 681 67.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
2270639 2270639 PRJEB7366_P_NODE_14662_length_205_cov_3.029412_g14228_i0 PRJEB7366 14662 205 3.029412 6.2102946 Trebouxia 13786 Plants Plants 374 3.3599999999999997e-99   NTclustered gi|162134340|gb|EU123979.1| 160068 g14228 i0 99.512 132.346341463415 205 1 100 0 1 205 1220 1424 Trebouxia aggregata strain SAG 219-1d large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf210) and hypothetical protein (orf277) genes, complete cds; chloroplast blastn 27131 374 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
12888783 12888783 PRJEB7366_P_NODE_10691_length_251_cov_4.060185_g10257_i0 PRJEB7366 10691 251 4.060185 10.19106435 Trebouxia sp. Wei 22-c 283661 Plants Plants 464 2.47e-126   NTclustered gi|49781197|gb|AY648107.1| 283661 g10257 i0 100 100.824701195219 251 0 100 0 1 251 1667 1417 Trebouxia sp. Wei 22-c 26S ribosomal RNA gene, partial sequence blastn 25307 464 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. Wei 22-c
12888829 12888829 PRJEB7366_P_NODE_331_length_1525_cov_2.571812_g234_i0 PRJEB7366 331 1525 2.571812 39.220133 Trebouxia sp. A1-2 2608996 Plants Plants 475 2.299999999999999e-153   NR KAA6427849.1 2608996 g234 i0 61.9 5.26229508196721 383 144 75 1 1517 375 686 1068 KAA6427849.1 MAG: elongation factor 3 [Trebouxia sp. A1-2] diamond 8025 475 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
13748949 13748949 PRJEB7366_P_NODE_21791_length_162_cov_1.133858_g21357_i0 PRJEB7366 21791 162 1.133858 1.83684996 Trebouxia 13786 Plants Plants 300 4.36e-77   NTclustered gi|162134382|gb|EU123993.1| 160068 g21357 i0 100 105.549382716049 162 0 100 0 1 162 4436 4597 Trebouxia aggregata strain SAG 219-1d small-subunit ribosomal RNA (rrs), 5S ribosomal RNA (rrf), and tRNA-Gly (trnG(gcc)) genes, complete sequence; chloroplast blastn 17099 300 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia aggregata
16711970 16711970 PRJEB7366_P_NODE_6914_length_332_cov_10.508418_g6480_i0 PRJEB7366 6914 332 10.508418 34.88794776 Trebouxia lynnae 1825957 Plants Plants 592 1.49e-164   NTclustered gi|1016111943|gb|KU716051.1| 1825957 g6480 i0 98.795 16.2831325301205 332 4 100 0 1 332 6992 6661 Trebouxia lynnae 26S-18S intergenic spacer region, partial sequence; 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence; and 26S-18S rRNA intergenic spacer region, partial sequence blastn 5406 592 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia lynnae
17986834 17986834 PRJEB7366_P_NODE_18575_length_177_cov_3.323944_g18141_i0 PRJEB7366 18575 177 3.323944 5.88338088 uncultured Trebouxia photobiont 285713 Plants Plants 311 2.23e-80   NTclustered gi|1273623725|gb|KY033354.1| 285713 g18141 i0 98.305 82.6497175141243 177 3 100 0 1 177 6626 6802 Uncultured Trebouxia photobiont voucher Lendemer 46119 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 14629 311 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia uncultured Trebouxia photobiont
25221682 25221682 PRJEB7366_P_NODE_22500_length_159_cov_1.290323_g22066_i0 PRJEB7366 22500 159 1.290323 2.05161357 Eukaryota 2759 Plants Plants 85.5 4.24e-20   NR GBG00610.1 307507 g22066 i0 76.9 30.1698113207547 52 12 98.1 0 2 157 8 59 GBG00610.1 60S ribosomal protein L11 [Raphidocelis subcapitata] diamond 4797 86.3 0.990730011587486 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
26622523 26622523 PRJEB7366_P_NODE_24541_length_151_cov_1.379310_g24107_i0 PRJEB7366 24541 151 1.37931 2.0827581 Coccomyxa viridis 1274662 Plants Plants 75.5 2.9e-14   NR CAK0734018.1 1274662 g24107 i0 68.8 0.95364238410596 48 15 95.4 0 149 6 247 294 CAK0734018.1 ATP-binding cassette sub- F member 1 [Coccomyxa viridis] diamond 144 75.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
26654006 26654006 PRJEB7366_P_NODE_23681_length_154_cov_1.344538_g23247_i0 PRJEB7366 23681 154 1.344538 2.07058852 [Myrmecia] bisecta 41462 Plants Plants 73.2 1.97e-13   NR KAK9811371.1 41462 g23247 i0 75.5 1.90909090909091 49 12 95.5 0 6 152 329 377 KAK9811371.1 hypothetical protein WJX72_002736 [[Myrmecia] bisecta] diamond 294 73.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
26907564 26907564 PRJEB7366_P_NODE_16862_length_188_cov_1.830065_g16428_i0 PRJEB7366 16862 188 1.830065 3.4405222 Trebouxia sp. A1-2 2608996 Plants Plants 72.8 4.54e-13   NR KAA6429626.1 2608996 g16428 i0 55.9 1.86702127659574 59 26 94.1 0 181 5 505 563 KAA6429626.1 MAG: cullin-3A-like [Trebouxia sp. A1-2] diamond 351 72.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
27413647 27413647 PRJEB7366_P_NODE_22203_length_160_cov_1.280000_g21769_i0 PRJEB7366 22203 160 1.28 2.048 Chlamydomonas eustigma 1157962 Plants Plants 50.1 3.04e-5   NR GAX83253.1 1157962 g21769 i0 51 0.95625 51 25 95.6 0 6 158 456 506 GAX83253.1 hypothetical protein CEUSTIGMA_g10679.t1 [Chlamydomonas eustigma] diamond 153 50.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
27658962 27658962 PRJEB7366_P_NODE_7724_length_310_cov_1.716364_g7290_i0 PRJEB7366 7724 310 1.716364 5.3207284 Chlamydomonas 3052 Plants Plants 94 1.6000000000000002e-22   NR GAX75589.1 1157962 g7290 i0 50.6 3.44516129032258 89 39 81.3 1 306 55 11 99 GAX75589.1 hypothetical protein CEUSTIGMA_g3033.t1 [Chlamydomonas eustigma] diamond 1068 94 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
27855391 27855391 PRJEB7366_P_NODE_21265_length_164_cov_1.550388_g20831_i0 PRJEB7366 21265 164 1.550388 2.54263632 Edaphochlamys debaryana 47281 Plants Plants 41.2 0.0459   NR KAG2493222.1 47281 g20831 i0 43.6 0.713414634146341 39 22 71.3 0 2 118 243 281 KAG2493222.1 hypothetical protein HYH03_008638 [Edaphochlamys debaryana] diamond 117 41.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
28006337 28006337 PRJEB7366_P_NODE_13025_length_221_cov_2.365591_g12591_i0 PRJEB7366 13025 221 2.3655910000000002 5.22795611 Eukaryota 2759 Plants Plants 110 9.13e-27   NR RMZ56444.1 3075 g12591 i0 77 56.2262443438914 74 16 99.1 1 1 219 116 189 RMZ56444.1 hypothetical protein APUTEX25_004667, partial [Auxenochlorella protothecoides] diamond 12426 111 0.990990990990991 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
28139849 28139849 PRJEB7366_P_NODE_11345_length_242_cov_1.932367_g10911_i0 PRJEB7366 11345 242 1.932367 4.67632814 Dunaliella salina 3046 Plants Plants 80.5 1.76e-15   NR KAF5826386.1 3046 g10911 i0 47.5 1.95867768595041 80 41 99.2 1 3 242 270 348 KAF5826386.1 concanavalin A-like lectin/glucanase domain-containing protein [Dunaliella salina] diamond 474 80.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
28321788 28321788 PRJEB7366_P_NODE_18886_length_176_cov_1.134752_g18452_i0 PRJEB7366 18886 176 1.134752 1.99716352 Eukaryota 2759 Plants Plants 73.6 4.29e-15   NR CAD7699363.1 121088 g18452 i0 57.9 1.96022727272727 57 24 97.2 0 2 172 2 58 CAD7699363.1 unnamed protein product [Ostreobium quekettii] diamond 345 74.3 0.990578734858681 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
28455540 28455540 PRJEB7366_P_NODE_6886_length_333_cov_2.761745_g6452_i0 PRJEB7366 6886 333 2.761745 9.19661085 Tetradesmus obliquus 3088 Plants Plants 47.8 0.00185   NR WIA32594.1 3088 g6452 i0 26.2 0.585585585585586 65 48 58.6 0 93 287 707 771 WIA32594.1 hypothetical protein OEZ86_003399 [Tetradesmus obliquus] diamond 195 47.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
28732356 28732356 PRJEB7366_P_NODE_24867_length_150_cov_1.043478_g24433_i0 PRJEB7366 24867 150 1.043478 1.565217 Chlorophyceae 3166 Plants Plants 45.4 0.00115   NR KAG2496114.1 47281 g24433 i0 55.9 2.76 34 15 68 0 106 5 41 74 KAG2496114.1 hypothetical protein HYH03_005717 [Edaphochlamys debaryana] diamond 414 45.8 0.991266375545852 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
28985180 28985180 PRJEB7366_P_NODE_6068_length_360_cov_2.406154_g5635_i0 PRJEB7366 6068 360 2.406154 8.6621544 Chlamydomonadales 3042 Plants Plants 169 6.13e-46   NR PNH08909.1 47790 g5635 i0 69.2 4.89166666666667 117 36 97.5 0 356 6 465 581 PNH08909.1 Elongation factor 2 [Tetrabaena socialis] diamond 1761 169 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Tetrabaenaceae Tetrabaena Tetrabaena socialis
29426722 29426722 PRJEB7366_P_NODE_18189_length_180_cov_1.103448_g17755_i0 PRJEB7366 18189 180 1.103448 1.9862064 Volvocaceae 3065 Plants Plants 49.3 4.78e-5   NR KXZ51926.1 33097 g17755 i0 53.3 1.56666666666667 45 20 73.3 1 166 35 12 56 KXZ51926.1 hypothetical protein GPECTOR_11g52 [Gonium pectorale] diamond 282 49.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
29497266 29497266 PRJEB7366_P_NODE_16610_length_190_cov_1.509677_g16176_i0 PRJEB7366 16610 190 1.509677 2.8683863 Astrephomene gubernaculifera 47775 Plants Plants 45.4 0.00206   NR GFR51040.1 47775 g16176 i0 52.5 3.37894736842105 40 19 63.2 0 190 71 256 295 GFR51040.1 hypothetical protein Agub_g13368, partial [Astrephomene gubernaculifera] diamond 642 45.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Astrephomenaceae Astrephomene Astrephomene gubernaculifera
29939532 29939532 PRJEB7366_P_NODE_17911_length_181_cov_1.917808_g17477_i0 PRJEB7366 17911 181 1.917808 3.47123248 Scenedesmus sp. PABB 2909984 Plants Plants 69.7 5.09e-12   NR KAF8072592.1 2742167 g17477 i0 60 1.9060773480663 55 22 91.2 0 180 16 114 168 KAF8072592.1 hypothetical protein HT031_000252 [Scenedesmus sp. PABB004] diamond 345 69.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
30319052 30319052 PRJEB7366_P_NODE_16152_length_193_cov_2.025316_g15718_i0 PRJEB7366 16152 193 2.025316 3.90885988 Astrephomene gubernaculifera 47775 Plants Plants 46.2 0.00117   NR GFR45785.1 47775 g15718 i0 38.4 3.01554404145078 73 35 99.5 2 192 1 183 254 GFR45785.1 hypothetical protein Agub_g7239 [Astrephomene gubernaculifera] diamond 582 46.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Astrephomenaceae Astrephomene Astrephomene gubernaculifera
31702033 31702033 PRJEB7366_P_NODE_24537_length_151_cov_1.379310_g24103_i0 PRJEB7366 24537 151 1.37931 2.0827581 Chlamydomonas 3052 Plants Plants 61.2 3.17e-9   NR XP_042916871.1 3055 g24103 i0 59.6 3.73509933774834 47 19 93.4 0 148 8 366 412 XP_042916871.1 uncharacterized protein CHLRE_14g621751v5 [Chlamydomonas reinhardtii] diamond 564 61.6 0.993506493506494 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
31962279 31962279 PRJEB7366_P_NODE_22498_length_159_cov_1.290323_g22064_i0 PRJEB7366 22498 159 1.290323 2.05161357 Coccomyxa viridis 1274662 Plants Plants 52.4 4.85e-6   NR CAL5220706.1 1274662 g22064 i0 50 0.943396226415094 50 23 94.3 1 150 1 429 476 CAL5220706.1 g2762 [Coccomyxa viridis] diamond 150 52.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
32050001 32050001 PRJEB7366_P_NODE_14698_length_205_cov_1.670588_g14264_i0 PRJEB7366 14698 205 1.670588 3.4247054 Eukaryota 2759 Plants Plants 50.4 4.45e-5   NR KAL4857085.1 3077 g14264 i0 38.8 3.98048780487805 67 40 98 1 205 5 117 182 KAL4857085.1 Pre-mRNA-processing protein 40A [Chlorella vulgaris] diamond 816 50.8 0.992125984251969 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
32247433 32247433 PRJEB7366_P_NODE_2218_length_654_cov_2.675283_g1853_i0 PRJEB7366 2218 654 2.675283 17.49635082 Coccomyxa subellipsoidea 248742 Plants Plants 209 2.55e-60   NR KAK9904316.1 248742 g1853 i0 52.1 0.995412844036697 217 95 98.6 4 646 2 16 225 KAK9904316.1 hypothetical protein WJX75_009042 [Coccomyxa subellipsoidea] diamond 651 209 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
32720975 32720975 PRJEB7366_P_NODE_23820_length_154_cov_1.008403_g23386_i0 PRJEB7366 23820 154 1.008403 1.55294062 Ulva fasciata 111617 Plants Plants 63.9 3.7e-10   NR ABB88582.1 111617 g23386 i0 60 3.8961038961039 50 18 97.4 1 4 153 251 298 ABB88582.1 catalase [Ulva fasciata] diamond 600 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva fasciata
32815365 32815365 PRJEB7366_P_NODE_18180_length_180_cov_1.103448_g17746_i0 PRJEB7366 18180 180 1.103448 1.9862064 Scenedesmus sp. PABB 2909984 Plants Plants 68.6 1.25e-11   NR KAF8071283.1 2742167 g17746 i0 46.6 0.966666666666667 58 31 96.7 0 178 5 845 902 KAF8071283.1 bglA [Scenedesmus sp. PABB004] diamond 174 68.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;