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contig_metadata

26 rows where bioproject = "PRJEB7366", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 26 ✖

tax_clade 1

  • Sar · 26 ✖

bioproject 1

  • PRJEB7366 · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1409843 1409843 PRJEB7366_P_NODE_22202_length_160_cov_1.280000_g21768_i0 PRJEB7366 22202 160 1.28 2.048 Phytopythium sindhum 795340 SAR_Eukaryotes SAR_Eukaryotes 78.7 2.19e-10   NTclustered gi|440919558|gb|JX436356.1| 795340 g21768 i0 94.118 1.48125 51 3 32 0 91 141 438 388 Phytopythium sindhum axoneme central apparatus PF16 gene, partial cds blastn 237 78.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Phytopythium Phytopythium sindhum
6513348 6513348 PRJEB7366_P_NODE_1866_length_718_cov_12.525622_g1527_i0 PRJEB7366 1866 718 12.525622 89.93396596 Hyaloperonospora parasitica 123356 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.02   NTclustered gi|170285697|emb|CU672270.3| 123356 g1527 i0 100 0.0403899721448468 29 0 4 0 683 711 1789 1761 H.parasitica DNA sequence from clone HpEmoy2-20J10, complete sequence blastn 29 54.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora parasitica
6513391 6513391 PRJEB7366_P_NODE_6406_length_348_cov_10.821086_g5972_i0 PRJEB7366 6406 348 10.821086 37.65737928 Hyaloperonospora parasitica 123356 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.009   NTclustered gi|170285697|emb|CU672270.3| 123356 g5972 i0 100 0.0833333333333333 29 0 8 0 313 341 1789 1761 H.parasitica DNA sequence from clone HpEmoy2-20J10, complete sequence blastn 29 54.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora parasitica
7787644 7787644 PRJEB7366_P_NODE_3187_length_531_cov_9.336694_g2780_i0 PRJEB7366 3187 531 9.336694 49.57784514 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 237 1.34e-57   NTclustered gi|695460914|ref|XM_009539807.1| 67593 g2780 i0 91.329 32.7815442561205 173 15 33 0 1 173 182 354 Phytophthora sojae hypothetical protein mRNA blastn 17407 237 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
8648688 8648688 PRJEB7366_P_NODE_6527_length_345_cov_1.619355_g6093_i0 PRJEB7366 6527 345 1.619355 5.58677475 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 168 1.7e-50   NR RHY18795.1 157072 g6093 i0 71.3 38.7565217391304 115 33 100 0 1 345 1 115 RHY18795.1 hypothetical protein DYB32_010329 [Aphanomyces invadans] diamond 13371 168 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
10338304 10338304 PRJEB7366_P_NODE_22809_length_157_cov_2.295082_g22375_i0 PRJEB7366 22809 157 2.295082 3.60327874 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.013   NTclustered gi|813155594|ref|XM_012346002.1| 695850 g22375 i0 100 0.178343949044586 28 0 18 0 95 122 194 167 Saprolegnia parasitica CBS 223.65 hypothetical protein mRNA blastn 28 52.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
10338314 10338314 PRJEB7366_P_NODE_2549_length_605_cov_9.538596_g2160_i0 PRJEB7366 2549 605 9.538596 57.7085058 Hyaloperonospora parasitica 123356 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.017   NTclustered gi|170285697|emb|CU672270.3| 123356 g2160 i0 100 0.0479338842975207 29 0 5 0 154 182 1789 1761 H.parasitica DNA sequence from clone HpEmoy2-20J10, complete sequence blastn 29 54.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora parasitica
14163674 14163674 PRJEB7366_P_NODE_3832_length_478_cov_1.532731_g3410_i0 PRJEB7366 3832 478 1.532731 7.32645418 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 213 9.410000000000001e-66   NR KAF1328520.1 82926 g3410 i0 72.6 2.7489539748954 146 40 91.6 0 1 438 186 331 KAF1328520.1 Malate dehydrogenase, nad-dependent, partial [Globisporangium splendens] diamond 1314 214 0.995327102803738 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
21812052 21812052 PRJEB7366_P_NODE_7418_length_318_cov_1.272085_g6984_i0 PRJEB7366 7418 318 1.272085 4.0452303 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 154 8.469999999999999e-43   NR TMW60420.1 41045 g6984 i0 72.5 10.311320754717 109 27 100 1 318 1 258 366 TMW60420.1 hypothetical protein Poli38472_000462 [Pythium oligandrum] diamond 3279 154 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
23948033 23948033 PRJEB7366_P_NODE_11719_length_237_cov_1.747525_g11285_i0 PRJEB7366 11719 237 1.747525 4.14163425 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 176 1.21e-39   NTclustered gi|2794916836|ref|XM_067893665.1| 164328 g11285 i0 84.153 5.60337552742616 183 27 77 2 56 237 413 232 Phytophthora ramorum Elongator complex protein 3 (KRP23_8248), partial mRNA blastn 1328 176 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
26622529 26622529 PRJEB7366_P_NODE_7601_length_313_cov_1.582734_g7167_i0 PRJEB7366 7601 313 1.582734 4.95395742 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 95.1 3.52e-20   NR KAF1330315.1 82926 g7167 i0 48 0.939297124600639 98 50 93.9 1 20 313 249 345 KAF1330315.1 putative arginine n-methyltransferase, partial [Globisporangium splendens] diamond 294 95.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
27855397 27855397 PRJEB7366_P_NODE_5705_length_375_cov_1.558824_g5272_i0 PRJEB7366 5705 375 1.558824 5.84559 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 55.5 5.82e-6   NR DAZ93356.1 4803 g5272 i0 34.3 4.896 102 44 81.6 3 2 307 97 175 DAZ93356.1 TPA: hypothetical protein N0F65_011882 [Lagenidium giganteum] diamond 1836 55.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
27879796 27879796 PRJEB7366_P_NODE_12525_length_227_cov_2.078125_g12091_i0 PRJEB7366 12525 227 2.078125 4.71734375 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 110 1.85e-27   NR KAF0736269.1 100861 g12091 i0 69.3 6.93832599118943 75 23 99.1 0 227 3 35 109 KAF0736269.1 hypothetical protein Ae201684_007291 [Aphanomyces euteiches] diamond 1575 110 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
27879803 27879803 PRJEB7366_P_NODE_8785_length_285_cov_1.968000_g8351_i0 PRJEB7366 8785 285 1.968 5.6088 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 118 1.38e-28   NR TMW55155.1 41045 g8351 i0 71.1 3.15789473684211 76 22 80 0 285 58 631 706 TMW55155.1 hypothetical protein Poli38472_013917 [Pythium oligandrum] diamond 900 119 0.991596638655462 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
27886931 27886931 PRJEB7366_P_NODE_18525_length_178_cov_1.118881_g18091_i0 PRJEB7366 18525 178 1.118881 1.99160818 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 60.5 8.09e-9   NR KAF0683170.1 120398 g18091 i0 67.4 2.81460674157303 43 14 72.5 0 131 3 36 78 KAF0683170.1 hypothetical protein As57867_024685 [Aphanomyces stellatus] diamond 501 60.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
29749585 29749585 PRJEB7366_P_NODE_2751_length_577_cov_1.974170_g2351_i0 PRJEB7366 2751 577 1.97417 11.3909609 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 237 4.41e-72   NR DAZ99584.1 4803 g2351 i0 59.6 1.02946273830156 198 72 99.8 2 576 1 312 507 DAZ99584.1 TPA: hypothetical protein N0F65_001412 [Lagenidium giganteum] diamond 594 237 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
30160290 30160290 PRJEB7366_P_NODE_18152_length_180_cov_1.379310_g17718_i0 PRJEB7366 18152 180 1.37931 2.482758 Bremia lactucae 4779 SAR_Eukaryotes SAR_Eukaryotes 63.5 7.2e-10   NR XP_067816464.1 4779 g17718 i0 52.5 2.95 59 25 98.3 1 3 179 93 148 XP_067816464.1 hypothetical protein CCR75_006177 [Bremia lactucae] diamond 531 63.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
30571042 30571042 PRJEB7366_P_NODE_24773_length_150_cov_1.391304_g24339_i0 PRJEB7366 24773 150 1.391304 2.086956 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.00783   NR KAF4041827.1 4787 g24339 i0 65.6 0.64 32 10 62 1 58 150 10 41 KAF4041827.1 FDF domain-containing protein [Phytophthora infestans] diamond 96 43.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
31132471 31132471 PRJEB7366_P_NODE_8915_length_283_cov_1.290323_g8481_i0 PRJEB7366 8915 283 1.290323 3.65161409 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 95.5 1.12e-20   NR KAH9158537.1 100861 g8481 i0 51.8 5.46996466431095 85 41 90.1 0 283 29 330 414 KAH9158537.1 hypothetical protein LEN26_002910 [Aphanomyces euteiches] diamond 1548 96.3 0.991692627206646 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
31171338 31171338 PRJEB7366_P_NODE_6215_length_355_cov_1.656250_g5782_i0 PRJEB7366 6215 355 1.65625 5.8796875 Saprolegnia diclina VS2 112098 SAR_Eukaryotes SAR_Eukaryotes 144 2.29e-37   NR XP_008606484.1 1156394 g5782 i0 57.8 1.97746478873239 116 48 98 1 8 355 348 462 XP_008606484.1 hypothetical protein SDRG_02669 [Saprolegnia diclina VS20] diamond 702 144 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
31512450 31512450 PRJEB7366_P_NODE_10676_length_252_cov_1.225806_g10242_i0 PRJEB7366 10676 252 1.225806 3.08903112 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 109 8.190000000000001e-27   NR TMW63800.1 41045 g10242 i0 62.7 5.92857142857143 83 31 98.8 0 3 251 162 244 TMW63800.1 hypothetical protein Poli38472_002741 [Pythium oligandrum] diamond 1494 110 0.990909090909091 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
31512456 31512456 PRJEB7366_P_NODE_24656_length_151_cov_0.991379_g24222_i0 PRJEB7366 24656 151 0.991379 1.49698229 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 65.9 7.45e-11   NR KAH9156009.1 100861 g24222 i0 69 3.41721854304636 42 13 83.4 0 142 17 587 628 KAH9156009.1 hypothetical protein AeRB84_002073 [Aphanomyces euteiches] diamond 516 66.2 0.995468277945619 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
31733490 31733490 PRJEB7366_P_NODE_22837_length_157_cov_1.926230_g22403_i0 PRJEB7366 22837 157 1.92623 3.0241811 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 62 1.76e-9   NR POM73557.1 4796 g22403 i0 54.2 14.6942675159236 48 22 91.7 0 3 146 245 292 POM73557.1 Major vault protein [Phytophthora palmivora] diamond 2307 62 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora palmivora
31867262 31867262 PRJEB7366_P_NODE_9777_length_266_cov_1.904762_g9343_i0 PRJEB7366 9777 266 1.904762 5.06666692 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 96.3 4.03e-21   NR XP_008867564.1 157072 g9343 i0 62.6 5.68421052631579 91 30 99.2 3 3 266 1 90 XP_008867564.1 hypothetical protein H310_04829 [Aphanomyces invadans] diamond 1512 96.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
32183880 32183880 PRJEB7366_P_NODE_11518_length_240_cov_1.356098_g11084_i0 PRJEB7366 11518 240 1.356098 3.2546352 Plasmopara halstedii 4781 SAR_Eukaryotes SAR_Eukaryotes 91.3 9.49e-20   NR XP_024576840.1 4781 g11084 i0 58.8 1.8375 68 28 85 0 240 37 245 312 XP_024576840.1 mitochondrial carrier family [Plasmopara halstedii] diamond 441 91.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
32461468 32461468 PRJEB7366_P_NODE_10479_length_255_cov_1.272727_g10045_i0 PRJEB7366 10479 255 1.272727 3.24545385 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 100 2.8299999999999993e-24   NR KAK1943133.1 4793 g10045 i0 56 2.94117647058824 84 33 98.8 1 253 2 9 88 KAK1943133.1 Diphosphomevalonate decarboxylase [Phytophthora citrophthora] diamond 750 101 0.99009900990099 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora citrophthora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;