RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJEB7366", tax_clade = "Sar" and tax_phylum = "Foraminifera"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB7366 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27350465 27350465 PRJEB7366_P_NODE_10503_length_254_cov_2.557078_g10069_i0 PRJEB7366 10503 254 2.557078 6.49497812 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 60.1 7.12e-9   NR ETO36728.1 46433 g10069 i0 33.3 0.992125984251969 84 56 99.2 0 1 252 85 168 ETO36728.1 hypothetical protein RFI_00333 [Reticulomyxa filosa] diamond 252 60.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28928950 28928950 PRJEB7366_P_NODE_14448_length_207_cov_1.883721_g14014_i0 PRJEB7366 14448 207 1.883721 3.89930247 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 49.7 3.62e-5   NR ETO36728.1 46433 g14014 i0 40.3 0.898550724637681 62 36 89.9 1 20 205 43 103 ETO36728.1 hypothetical protein RFI_00333 [Reticulomyxa filosa] diamond 186 49.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29371094 29371094 PRJEB7366_P_NODE_6529_length_345_cov_1.409677_g6095_i0 PRJEB7366 6529 345 1.409677 4.86338565 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 171 6.44e-50   NR ETO32231.1 46433 g6095 i0 73.7 0.991304347826087 114 30 99.1 0 344 3 174 287 ETO32231.1 ATP citrate lyase [Reticulomyxa filosa] diamond 342 171 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30919003 30919003 PRJEB7366_P_NODE_10134_length_260_cov_1.777778_g9700_i0 PRJEB7366 10134 260 1.777778 4.6222228 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 106 1.5499999999999998e-24   NR ETO15300.1 46433 g9700 i0 62.2 0.946153846153846 82 31 94.6 0 258 13 663 744 ETO15300.1 hypothetical protein RFI_22066 [Reticulomyxa filosa] diamond 246 106 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;