RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB7366", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJEB7366 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5237826 5237826 PRJEB7366_P_NODE_5125_length_401_cov_1.407104_g4692_i0 PRJEB7366 5125 401 1.407104 5.64248704 Pseudomonadati 3379134 Bacteria Bacteria 156 1.84e-41   NR WP_304143794.1 591197 g4692 i0 60.2 10.4438902743142 128 51 95.8 0 399 16 521 648 WP_304143794.1 glycoside hydrolase family 3 N-terminal domain-containing protein [Ignavibacterium album] diamond 4188 156 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium album
30539632 30539632 PRJEB7366_P_NODE_15793_length_196_cov_1.422360_g15359_i0 PRJEB7366 15793 196 1.42236 2.7878256 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 62 3.17e-10   NR NUN08168.1 2651163 g15359 i0 42.2 0.979591836734694 64 37 98 0 5 196 60 123 NUN08168.1 hypothetical protein [Ignavibacteriaceae bacterium] diamond 192 62 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
31930581 31930581 PRJEB7366_P_NODE_24497_length_151_cov_1.568966_g24063_i0 PRJEB7366 24497 151 1.568966 2.36913866 Ignavibacteria bacterium 2053306 Bacteria Bacteria 59.3 3.05e-9   NR MEO8514819.1 2053306 g24063 i0 64.1 2.64238410596026 39 14 77.5 0 126 10 119 157 MEO8514819.1 TspO/MBR family protein [Ignavibacteria bacterium] diamond 399 59.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;