RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB7366", tax_clade = "Bacteria candidate phyla" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJEB7366 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21811998 21811998 PRJEB7366_P_NODE_12478_length_228_cov_1.036269_g12044_i0 PRJEB7366 12478 228 1.036269 2.36269332 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 123 1.6999999999999996e-31   NR MBN1549743.1 2803731 g12044 i0 69.7 14.9078947368421 76 23 100 0 228 1 270 345 MBN1549743.1 elongation factor Tu [Candidatus Babeliales bacterium] diamond 3399 123 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
26678488 26678488 PRJEB7366_P_NODE_5861_length_369_cov_1.619760_g5428_i0 PRJEB7366 5861 369 1.61976 5.9769144 Bacteria 2 Bacteria Bacteria 45.1 0.0156   NR KKU63335.1 1618590 g5428 i0 51.7 1.47967479674797 58 22 44.7 3 17 181 80 134 KKU63335.1 MAG: Chaperone protein DnaJ [Candidatus Woesebacteria bacterium GW2011_GWC2_47_16] diamond 546 45.1 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium GW2011_GWC2_47_16
27603031 27603031 PRJEB7366_P_NODE_5704_length_375_cov_1.647059_g5271_i0 PRJEB7366 5704 375 1.647059 6.17647125 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 51.2 1.73e-4   NR HOT77143.1 2053640 g5271 i0 29.2 3.888 89 63 71.2 0 76 342 181 269 HOT77143.1 NAD-glutamate dehydrogenase [Candidatus Wallbacteria bacterium] diamond 1458 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
32468820 32468820 PRJEB7366_P_NODE_3279_length_524_cov_1.932515_g2867_i0 PRJEB7366 3279 524 1.932515 10.1263786 Minisyncoccota bacterium 2053589 Bacteria Bacteria 46.2 0.035   NR MBD3279698.1 2053589 g2867 i0 27.9 0.49236641221374 86 47 41.2 3 444 229 692 776 MBD3279698.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 258 46.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;