RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB73599" and tax_phylum = "Thermodesulfobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJEB73599 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20122040 20122040 PRJEB73599_P_NODE_876_length_802_cov_15.983182_g714_i0 PRJEB73599 876 802 15.983182 128.18511964 Pseudomonadati 3379134 Bacteria Bacteria 684 0   NTclustered gi|2891482193|emb|OZ219926.1| 2202153 g714 i0 84.549 136.895261845387 699 98 86 8 1 692 775250 775945 MAG: Thermodesulfobacteriota bacterium isolate 21442c6b-cc68-4f82-8039-a5361455a999 genome assembly, chromosome: 3 blastn 109790 684 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
27286977 27286977 PRJEB73599_P_NODE_3843_length_355_cov_1.889571_g3557_i0 PRJEB73599 3843 355 1.889571 6.70797705 Pseudodesulfovibrio profundus 57320 Bacteria Bacteria 72 3.49e-12   NR SOB57421.1 57320 g3557 i0 54.1 1.03098591549296 61 28 51.5 0 192 10 140 200 SOB57421.1 conserved protein of unknown function [Pseudodesulfovibrio profundus] diamond 366 72 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Pseudodesulfovibrio Pseudodesulfovibrio profundus
32183876 32183876 PRJEB73599_P_NODE_7238_length_212_cov_1.918033_g6951_i0 PRJEB73599 7238 212 1.918033 4.06622996 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 107 1.87e-25   NR MFC1836026.1 2202153 g6951 i0 74.6 15.2264150943396 71 17 99.1 1 212 3 167 237 MFC1836026.1 acetyl-CoA C-acyltransferase [Thermodesulfobacteriota bacterium] diamond 3228 107 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;