RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB73599" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB73599 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9062463 9062463 PRJEB73599_P_NODE_6508_length_234_cov_2.107317_g6221_i0 PRJEB73599 6508 234 2.107317 4.93112178 Siphonaria japonica 981056 Mollusca Mollusca 89.8 1.6e-13   NTclustered gi|1229196001|gb|KX529886.1| 981056 g6221 i0 79.675 4.88034188034188 123 25 53 0 106 228 738 860 Siphonaria japonica beta-tubulin mRNA, partial cds blastn 1142 89.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Siphonariida Siphonariidae Siphonaria Siphonaria japonica
29111322 29111322 PRJEB73599_P_NODE_6008_length_251_cov_2.063063_g5721_i0 PRJEB73599 6008 251 2.063063 5.17828813 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 49.7 1.49e-4   NR KAK3779016.1 231223 g5721 i0 39.8 2.92828685258964 83 50 99.2 0 1 249 790 872 KAK3779016.1 hypothetical protein RRG08_034274 [Elysia crispata] diamond 735 50.1 0.992015968063872 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia crispata
30002693 30002693 PRJEB73599_P_NODE_9231_length_167_cov_1.471014_g8944_i0 PRJEB73599 9231 167 1.471014 2.45659338 Aplysia californica 6500 Mollusca Mollusca 76.3 2.02e-14   NR XP_005094744.1 6500 g8944 i0 61.8 0.988023952095808 55 21 98.8 0 3 167 189 243 XP_005094744.1 long-chain-fatty-acid--CoA ligase 5 isoform X4 [Aplysia californica] diamond 165 76.3 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
31670351 31670351 PRJEB73599_P_NODE_1957_length_530_cov_2.127745_g1707_i0 PRJEB73599 1957 530 2.127745 11.2770485 Metazoa 33208 Mollusca Mollusca 136 1.69e-35   NR CAG5124857.1 100452 g1707 i0 65.1 1.92452830188679 86 30 48.7 0 260 3 241 326 CAG5124857.1 unnamed protein product [Candidula unifasciata] diamond 1020 137 0.992700729927007 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Geomitridae Candidula Candidula unifasciata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;