RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB73599", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB73599 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28392187 28392187 PRJEB73599_P_NODE_3986_length_346_cov_4.482650_g3699_i0 PRJEB73599 3986 346 4.48265 15.509969 Rodentolepis nana 102285 Platyhelminthes Platyhelminthes 52.8 3e-5   NR VDO09905.1 102285 g3699 i0 39.7 2.03757225433526 78 41 66.8 3 73 303 208 280 VDO09905.1 unnamed protein product [Rodentolepis nana] diamond 705 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Rodentolepis Rodentolepis nana
30248324 30248324 PRJEB73599_P_NODE_3472_length_381_cov_6.508523_g3186_i0 PRJEB73599 3472 381 6.508523 24.79747263 Cyclophyllidea 6201 Platyhelminthes Platyhelminthes 52.8 4.1e-5   NR CDS37392.1 6211 g3186 i0 41 1.80314960629921 78 34 58.3 4 80 301 206 275 CDS37392.1 calbindin 32 [Echinococcus multilocularis] diamond 687 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus multilocularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;