RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB73599", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB73599 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28107874 28107874 PRJEB73599_P_NODE_4325_length_327_cov_2.644295_g4038_i0 PRJEB73599 4325 327 2.644295 8.64684465 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 77.4 1.7e-15   NR XP_028533300.1 85471 g4038 i0 51.9 0.724770642201835 79 38 72.5 0 55 291 13 91 XP_028533300.1 60S ribosomal protein L35ae, putative [Plasmodium relictum] diamond 237 77.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
29086948 29086948 PRJEB73599_P_NODE_3128_length_407_cov_2.349206_g2842_i0 PRJEB73599 3128 407 2.349206 9.56126842 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 77.8 2.88e-15   NR XP_028533300.1 85471 g2842 i0 51.9 0.582309582309582 79 38 58.2 0 55 291 13 91 XP_028533300.1 60S ribosomal protein L35ae, putative [Plasmodium relictum] diamond 237 77.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
31266456 31266456 PRJEB73599_P_NODE_4155_length_336_cov_2.543974_g3868_i0 PRJEB73599 4155 336 2.543974 8.54775264 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 76.6 3.83e-15   NR KAF8822490.1 476202 g3868 i0 55.9 3.30357142857143 68 30 60.7 0 206 3 33 100 KAF8822490.1 ribosomal protein RPL31 [Cardiosporidium cionae] diamond 1110 76.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;