RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB73599", tax_clade = "Luna-1 subcluster" and tax_kingdom = "Bacillati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bacillati · 2 ✖

tax_clade 1

  • Luna-1 subcluster · 2 ✖

bioproject 1

  • PRJEB73599 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16298161 16298161 PRJEB73599_P_NODE_8453_length_182_cov_1.751634_g8166_i0 PRJEB73599 8453 182 1.751634 3.18797388 Rhodoluna 529883 Bacteria Bacteria 315 1.79e-81   NTclustered gi|1666461687|gb|CP040509.1| 232537 g8166 i0 97.802 106.203296703297 182 4 100 0 1 182 476860 477041 Rhodoluna limnophila strain 27D-LEPI chromosome, complete genome blastn 19329 315 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna limnophila
23948014 23948014 PRJEB73599_P_NODE_3439_length_383_cov_64.118644_g3153_i0 PRJEB73599 3439 383 64.118644 245.57440652 Rhodoluna 529883 Bacteria Bacteria 664 0   NTclustered gi|1666461687|gb|CP040509.1| 232537 g3153 i0 97.911 185.185378590078 383 8 100 0 1 383 478033 477651 Rhodoluna limnophila strain 27D-LEPI chromosome, complete genome blastn 70926 664 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna limnophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;