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contig_metadata

27 rows where bioproject = "PRJEB73599" and tax_clade = "Embryophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 27 ✖

bioproject 1

  • PRJEB73599 · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
135201 135201 PRJEB73599_P_NODE_6921_length_221_cov_5.578125_g6634_i0 PRJEB73599 6921 221 5.578125 12.32765625 Rutidosis leptorrhynchoides 125765 Plants Plants 56.5 0.002   NTclustered gi|2922556849|ref|XR_011771451.1| 125765 g6634 i0 94.444 0.606334841628959 36 2 16 0 186 221 3148 3113 PREDICTED: Rutidosis leptorrhynchoides 28S ribosomal RNA (LOC139880634), rRNA blastn 134 56.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Rutidosis Rutidosis leptorrhynchoides
995519 995519 PRJEB73599_P_NODE_6561_length_232_cov_2.389163_g6274_i0 PRJEB73599 6561 232 2.389163 5.54285816 Magnoliopsida 3398 Plants Plants 429 8.2e-116   NTclustered gi|2328347789|ref|NC_067573.1| 16915 g6274 i0 100 198 232 0 100 0 1 232 110388 110157 Helwingia japonica chloroplast, complete sequence blastn 45936 429 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Aquifoliales Helwingiaceae Helwingia Helwingia japonica
1409758 1409758 PRJEB73599_P_NODE_3722_length_363_cov_4.928144_g3436_i0 PRJEB73599 3722 363 4.928144 17.88916272 Allium semenovii 165656 Plants Plants 392 1.7899999999999994e-104   NTclustered gi|2072688532|gb|MZ019479.1| 165656 g3436 i0 86.761 174.04958677686 355 44 98 3 9 362 135562 135914 Allium semenovii chloroplast blastn 63180 392 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Amaryllidaceae Allium Allium semenovii
2270628 2270628 PRJEB73599_P_NODE_7022_length_218_cov_3.000000_g6735_i0 PRJEB73599 7022 218 3 6.54 Streptophyta 35493 Plants Plants 72.8 1.35e-13   NR CAM6026948.1 128184 g6735 i0 80 31.1422018348624 40 8 55 0 215 96 136 175 CAM6026948.1 unnamed protein product [Sphagnum balticum] diamond 6789 73.2 0.994535519125683 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum balticum
6513240 6513240 PRJEB73599_P_NODE_1326_length_647_cov_2.752427_g1123_i0 PRJEB73599 1326 647 2.752427 17.80820269 Streptophyta 35493 Plants Plants 206 1.48e-63   NR KAI5068948.1 13818 g1123 i0 54.9 24.0185471406492 215 79 99.7 5 2 646 1 197 KAI5068948.1 hypothetical protein GOP47_0015249 [Adiantum capillus-veneris] diamond 15540 207 0.995169082125604 Eukaryota Embryophyta Viridiplantae Streptophyta Polypodiopsida Polypodiales Pteridaceae Adiantum Adiantum capillus-veneris
6513255 6513255 PRJEB73599_P_NODE_3046_length_414_cov_1.942857_g2761_i0 PRJEB73599 3046 414 1.942857 8.04342798 Eukaryota 2759 Plants Plants 102 4.41e-22   NR MCL7034904.1 74823 g2761 i0 51.5 6.32608695652174 97 47 70.3 0 292 2 494 590 MCL7034904.1 hypothetical protein [Papaver nudicaule] diamond 2619 103 0.990291262135922 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Papaveraceae Papaver Papaver nudicaule
7787540 7787540 PRJEB73599_P_NODE_4007_length_345_cov_3.655063_g3720_i0 PRJEB73599 4007 345 3.655063 12.60996735 Hordeum vulgare 4513 Plants Plants 91.6 6.92e-14   NTclustered gi|2133663016|ref|XR_006614513.1| 112509 g3720 i0 80.672 0.344927536231884 119 22 34 1 228 345 3124 3006 PREDICTED: Hordeum vulgare subsp. vulgare 28S ribosomal RNA (LOC123414581), rRNA blastn 119 91.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
13748925 13748925 PRJEB73599_P_NODE_6571_length_232_cov_2.113300_g6284_i0 PRJEB73599 6571 232 2.1133 4.902856 Poaceae 4479 Plants Plants 148 2.57e-31   NTclustered gi|2123588875|ref|XR_006435870.1| 4565 g6284 i0 87.597 48.5215517241379 129 14 56 2 6 134 408 282 PREDICTED: Triticum aestivum 28S ribosomal RNA (LOC123074126), rRNA blastn 11257 148 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
15437674 15437674 PRJEB73599_P_NODE_6393_length_238_cov_1.861244_g6106_i0 PRJEB73599 6393 238 1.861244 4.42976072 Sesamum indicum 4182 Plants Plants 100 7.53e-17   NTclustered gi|1173814337|ref|XM_011088454.2| 4182 g6106 i0 88.235 1.71008403361345 85 8 35 2 136 219 1117 1200 PREDICTED: Sesamum indicum NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like (LOC105168390), transcript variant X2, mRNA blastn 407 100 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Pedaliaceae Sesamum Sesamum indicum
15437686 15437686 PRJEB73599_P_NODE_8053_length_191_cov_1.518519_g7766_i0 PRJEB73599 8053 191 1.518519 2.90037129 Jacobaea vulgaris 98722 Plants Plants 52.8 0.016   NTclustered gi|2918395481|emb|OZ238157.1| 98722 g7766 i0 96.875 0.167539267015707 32 0 16 1 77 107 26828179 26828148 Jacobaea vulgaris genome assembly, chromosome: 9 blastn 32 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Jacobaea Jacobaea vulgaris
16711879 16711879 PRJEB73599_P_NODE_7434_length_206_cov_1.711864_g7147_i0 PRJEB73599 7434 206 1.711864 3.52643984 Alnus glutinosa 3517 Plants Plants 86.1 1.78e-12   NTclustered gi|2649024920|ref|XM_062321708.1| 3517 g7147 i0 91.935 15.5388349514563 62 4 30 1 94 155 704 764 PREDICTED: Alnus glutinosa large ribosomal subunit protein uL2m (LOC133882519), mRNA blastn 3201 86.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Betulaceae Alnus Alnus glutinosa
16711899 16711899 PRJEB73599_P_NODE_9994_length_153_cov_2.096774_g9707_i0 PRJEB73599 9994 153 2.096774 3.20806422 Hibiscus syriacus 106335 Plants Plants 76.8 7.44e-10   NTclustered gi|1965313940|ref|XM_039188856.1| 106335 g9707 i0 95.745 1.5359477124183 47 2 31 0 61 107 777 731 PREDICTED: Hibiscus syriacus 60S ribosomal protein L7-2-like (LOC120184367), mRNA blastn 235 76.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Hibiscus Hibiscus syriacus
17986722 17986722 PRJEB73599_P_NODE_1155_length_700_cov_2.754098_g966_i0 PRJEB73599 1155 700 2.754098 19.278686 Oryza sativa 4530 Plants Plants 1181 0   NTclustered gi|116641696|emb|CT837035.1| 39946 g966 i0 97.429 1 700 5 100 1 1 700 594 1280 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA119L05, full insert sequence blastn 700 1181 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
20536084 20536084 PRJEB73599_P_NODE_3997_length_346_cov_1.870662_g3710_i0 PRJEB73599 3997 346 1.870662 6.47249052 Riccia fluitans 41844 Plants Plants 115 6.1399999999999995e-30   NR KAL2623906.1 41844 g3710 i0 81.8 1.71676300578035 66 12 57.2 0 83 280 80 145 KAL2623906.1 hypothetical protein R1flu_008151 [Riccia fluitans] diamond 594 115 1 Eukaryota Embryophyta Viridiplantae Streptophyta Marchantiopsida Marchantiales Ricciaceae Riccia Riccia fluitans
23948015 23948015 PRJEB73599_P_NODE_4379_length_324_cov_2.461017_g4092_i0 PRJEB73599 4379 324 2.461017 7.97369508 Polypodiales 3268 Plants Plants 76.8 1.81e-9   NTclustered gi|2050223811|gb|MZ361031.1| 41974 g4092 i0 92.593 1.5 54 2 17 2 4 57 7151 7100 Pleurosoriopsis makinoi voucher X.C. Zhang 9478 (PE) small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 486 76.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Polypodiopsida Polypodiales Polypodiaceae Pleurosoriopsis Pleurosoriopsis makinoi
26837192 26837192 PRJEB73599_P_NODE_8141_length_189_cov_1.443750_g7854_i0 PRJEB73599 8141 189 1.44375 2.7286875 Magnoliopsida 3398 Plants Plants 62 2.86e-9   NR GMH03277.1 150966 g7854 i0 47.5 3.87301587301587 61 32 96.8 0 3 185 725 785 GMH03277.1 hypothetical protein Nepgr_005116 [Nepenthes gracilis] diamond 732 62 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Nepenthaceae Nepenthes Nepenthes gracilis
27879795 27879795 PRJEB73599_P_NODE_5585_length_267_cov_2.147059_g5298_i0 PRJEB73599 5585 267 2.147059 5.73264753 Viridiplantae 33090 Plants Plants 64.3 6.07e-11   NR KAJ6756078.1 77065 g5298 i0 54.2 4.31460674157303 72 31 79.8 2 15 227 41 111 KAJ6756078.1 30S 40S RIBOSOMAL PROTEIN [Salix purpurea] diamond 1152 64.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Salix Salix purpurea
28669289 28669289 PRJEB73599_P_NODE_2147_length_506_cov_2.750524_g1891_i0 PRJEB73599 2147 506 2.750524 13.91765144 Eukaryota 2759 Plants Plants 137 2.4e-36   NR QDX19557.1 39947 g1891 i0 46 13.0079051383399 163 82 93.7 2 482 9 5 166 QDX19557.1 hypothetical protein [Oryza sativa Japonica Group] diamond 6582 138 0.992753623188406 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
29213335 29213335 PRJEB73599_P_NODE_4609_length_311_cov_2.460993_g4322_i0 PRJEB73599 4609 311 2.460993 7.65368823 Anisodus tanguticus 243964 Plants Plants 42.7 0.0465   NR KAK4369194.1 243964 g4322 i0 45.2 0.405144694533762 42 23 40.5 0 154 29 6 47 KAK4369194.1 hypothetical protein RND71_012986 [Anisodus tanguticus] diamond 126 42.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Anisodus Anisodus tanguticus
29371074 29371074 PRJEB73599_P_NODE_8189_length_188_cov_1.515723_g7902_i0 PRJEB73599 8189 188 1.515723 2.84955924 Tanacetum cinerariifolium 118510 Plants Plants 76.3 2.77e-14   NR GEU28527.1 118510 g7902 i0 75 3.15957446808511 52 12 83 1 33 188 3425 3475 GEU28527.1 aspartate--tRNA ligase, chloroplastic/mitochondrial [Tanacetum cinerariifolium] diamond 594 76.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
29616040 29616040 PRJEB73599_P_NODE_4110_length_339_cov_1.909677_g3823_i0 PRJEB73599 4110 339 1.909677 6.47380503 Eukaryota 2759 Plants Plants 53.9 4.48e-6   NR PWZ11267.1 4577 g3823 i0 44.7 3.17699115044248 76 40 66.4 2 1 225 13 87 PWZ11267.1 Uncharacterized protein Zm00014a_012555 [Zea mays] diamond 1077 53.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zea Zea mays
30816809 30816809 PRJEB73599_P_NODE_3494_length_380_cov_1.629630_g3208_i0 PRJEB73599 3494 380 1.62963 6.192594 Streptophyta 35493 Plants Plants 129 2.36e-32   NR KAG0567129.1 3225 g3208 i0 56.8 3.97105263157895 132 50 98.7 2 6 380 309 440 KAG0567129.1 hypothetical protein KC19_7G112700 [Ceratodon purpureus] diamond 1509 129 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Pseudoditrichales Ditrichaceae Ceratodon Ceratodon purpureus
30855553 30855553 PRJEB73599_P_NODE_10154_length_150_cov_2.165289_g9867_i0 PRJEB73599 10154 150 2.165289 3.2479335 Brassica carinata 52824 Plants Plants 48.5 7.03e-5   NR KAL0642007.1 52824 g9867 i0 67.5 0.8 40 10 78 2 146 30 18 55 KAL0642007.1 hypothetical protein Bca4012_102970 [Brassica carinata] diamond 120 48.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica carinata
31266457 31266457 PRJEB73599_P_NODE_5555_length_268_cov_2.548117_g5268_i0 PRJEB73599 5555 268 2.548117 6.82895356 Durio zibethinus 66656 Plants Plants 83.2 6.09e-18   NR XP_022752929.1 66656 g5268 i0 61.8 2.18283582089552 68 20 69.4 1 78 263 64 131 XP_022752929.1 SUMO-conjugating enzyme UBC9-like isoform X1 [Durio zibethinus] diamond 585 83.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Durio Durio zibethinus
31638650 31638650 PRJEB73599_P_NODE_7536_length_203_cov_1.982759_g7249_i0 PRJEB73599 7536 203 1.982759 4.02500077 Streptophyta 35493 Plants Plants 81.6 3.35e-16   NR KAG6545352.1 56867 g7249 i0 57.9 12.3546798029557 76 22 97.5 1 203 6 128 203 KAG6545352.1 hypothetical protein Mapa_013201 [Marchantia paleacea] diamond 2508 81.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Marchantiopsida Marchantiales Marchantiaceae Marchantia Marchantia paleacea
32342231 32342231 PRJEB73599_P_NODE_819_length_836_cov_1.950434_g662_i0 PRJEB73599 819 836 1.950434 16.30562824 Cryptomeria japonica 3369 Plants Plants 160 9.29e-43   NR XP_057865708.1 3369 g662 i0 43.2 2.47607655502392 222 104 75 9 90 716 62 274 XP_057865708.1 cysteine proteinase 15A [Cryptomeria japonica] diamond 2070 160 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
32745346 32745346 PRJEB73599_P_NODE_8040_length_191_cov_1.895062_g7753_i0 PRJEB73599 8040 191 1.895062 3.61956842 Eukaryota 2759 Plants Plants 76.6 2.09e-14   NR TVU17487.1 38414 g7753 i0 68.8 13.7120418848168 64 19 99 1 2 190 291 354 TVU17487.1 hypothetical protein EJB05_33525, partial [Eragrostis curvula] diamond 2619 77 0.994805194805195 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Eragrostis Eragrostis curvula

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;