RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB73599", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJEB73599 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
135190 135190 PRJEB73599_P_NODE_4581_length_313_cov_1.950704_g4294_i0 PRJEB73599 4581 313 1.950704 6.10570352 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 412 1.1699999999999996e-110   NTclustered gi|1950821269|gb|CP066696.1| 2026720 g4294 i0 91.639 77.4121405750799 299 23 95 2 5 302 800091 799794 Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome blastn 24230 412 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
6513283 6513283 PRJEB73599_P_NODE_5746_length_260_cov_3.116883_g5459_i0 PRJEB73599 5746 260 3.116883 8.1038958 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 353 5.8e-93   NTclustered gi|2874254002|emb|OY970327.1| 2890869 g5459 i0 91.221 266.530769230769 262 19 100 3 1 260 679844 679585 MAG: Candidatus Saccharimonadia bacterium isolate MFD01275.bin.c.7 genome assembly, chromosome: 1 blastn 69298 353 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
31899051 31899051 PRJEB73599_P_NODE_7777_length_197_cov_1.297619_g7490_i0 PRJEB73599 7777 197 1.297619 2.55630943 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 65.1 2.26e-10   NR MDO8336486.1 2026720 g7490 i0 54.8 0.944162436548223 62 27 92.9 1 7 189 119 180 MDO8336486.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 186 65.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;