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contig_metadata

20 rows where bioproject = "PRJEB673" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 20 ✖

bioproject 1

  • PRJEB673 · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1409515 1409515 PRJEB673_P_NODE_6422_length_343_cov_2.798701_g6073_i0 PRJEB673 6422 343 2.798701 9.59954443 Orthopoxvirus monkeypox 3431483 Viruses Viruses 54.7 0.009   NTclustered gi|2309594316|gb|OP536747.1| 10244 g6073 i0 100 8.45481049562682 29 0 8 0 8 36 119302 119274 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
16711637 16711637 PRJEB673_P_NODE_9414_length_198_cov_1.226994_g9065_i0 PRJEB673 9414 198 1.226994 2.42944812 Weissella phage phiYS61 1161906 Viruses Viruses 52.8 0.017   NTclustered gi|399528370|ref|NC_018270.1| 1161906 g9065 i0 100 0.141414141414141 28 0 14 0 113 140 21003 20976 Weissella phage phiYS61, complete genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Weissella phage phiYS61
20535803 20535803 PRJEB673_P_NODE_2717_length_600_cov_1.658407_g2416_i0 PRJEB673 2717 600 1.658407 9.950442 Cripavirus sp. 1955141 Viruses Viruses 186 1.22e-50   NR ULF99874.1 1955141 g2416 i0 46.7 3.95 197 105 98.5 0 599 9 1517 1713 ULF99874.1 MAG: hypothetical protein 1 [Cripavirus sp.] diamond 2370 186 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Cripavirus sp.
21811736 21811736 PRJEB673_P_NODE_98_length_2363_cov_2.653780_g63_i0 PRJEB673 98 2363 2.65378 62.7088214 Cripavirus 144051 Viruses Viruses 212 7.839999999999998e-54   NR ULF99858.1 1955141 g63 i0 42.3 2.15700380871773 307 152 35.8 6 2334 1489 197 503 ULF99858.1 MAG: hypothetical protein 2 [Cripavirus sp.] diamond 5097 212 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Cripavirus sp.
26748802 26748802 PRJEB673_P_NODE_9241_length_205_cov_1.141176_g8892_i0 PRJEB673 9241 205 1.141176 2.3394108 Adintovirus pavo15764 3115938 Viruses Viruses 43.5 0.011   NR DBA50334.1 3115938 g8892 i0 45.5 0.64390243902439 44 24 64.4 0 164 33 214 257 DBA50334.1 MAG TPA_asm: Penton [Adintovirus pavo15764] diamond 132 43.5 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus pavo15764
26876171 26876171 PRJEB673_P_NODE_1_length_6210_cov_3.522915_g0_i0 PRJEB673 1 6210 3.522915 218.7730215 Ripucork virus 3130406 Viruses Viruses 347 7.69e-100   NR WZH59587.1 3130406 g0 i0 34.4 0.297584541062802 616 377 29.1 10 1215 3023 12 613 WZH59587.1 MAG: RNA-dependent RNA polymerase [Ripucork virus] diamond 1848 347 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae   Ripucork virus
27152894 27152894 PRJEB673_P_NODE_1822_length_716_cov_1.444934_g1574_i0 PRJEB673 1822 716 1.444934 10.34572744 Cripavirus 144051 Viruses Viruses 102 1.12e-20   NR NP_044946.1 64279 g1574 i0 44.8 2.47206703910615 116 63 48.2 1 163 507 16 131 NP_044946.1 capsid polyprotein, partial [Drosophila C virus] diamond 1770 103 0.990291262135922 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Cripavirus drosophilae
27160257 27160257 PRJEB673_P_NODE_5322_length_387_cov_1.727273_g4973_i0 PRJEB673 5322 387 1.727273 6.68454651 Adintovirus bos4377 3115894 Viruses Viruses 51.6 9.95e-5   NR DBA50496.1 3115894 g4973 i0 42.5 0.62015503875969 80 46 62 0 30 269 112 191 DBA50496.1 MAG TPA_asm: Adintoc2 [Adintovirus bos4377] diamond 240 51.6 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
28013469 28013469 PRJEB673_P_NODE_8845_length_232_cov_1.086294_g8496_i0 PRJEB673 8845 232 1.086294 2.52020208 Adintovirus bos4377 3115894 Viruses Viruses 49.3 1.33e-4   NR DBA50496.1 3115894 g8496 i0 68.8 0.413793103448276 32 10 41.4 0 229 134 177 208 DBA50496.1 MAG TPA_asm: Adintoc2 [Adintovirus bos4377] diamond 96 49.3 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
28708057 28708057 PRJEB673_P_NODE_10567_length_172_cov_1.007299_g10218_i0 PRJEB673 10567 172 1.007299 1.73255428 Gremmeniella abietina RNA virus MS1 191436 Viruses Viruses 68.9 1e-12   NR AII15934.1 191436 g10218 i0 51.8 1.95348837209302 56 27 97.7 0 172 5 40 95 AII15934.1 RNA-dependent RNA polymerase, partial [Gremmeniella abietina RNA virus MS1] diamond 336 68.9 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Gammapartitivirus Gammapartitivirus gremmeniellae
28992383 28992383 PRJEB673_P_NODE_4828_length_418_cov_2.574413_g4480_i0 PRJEB673 4828 418 2.574413 10.76104634 Adintovirus bos4377 3115894 Viruses Viruses 139 8.47e-38   NR DBA50496.1 3115894 g4480 i0 55.1 0.990430622009569 138 62 99 0 2 415 63 200 DBA50496.1 MAG TPA_asm: Adintoc2 [Adintovirus bos4377] diamond 414 139 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
29307756 29307756 PRJEB673_P_NODE_2029_length_682_cov_2.284389_g1766_i0 PRJEB673 2029 682 2.284389 15.57953298 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 261 6.750000000000001e-79   NR XCM68377.1 3003959 g1766 i0 58.7 7.95307917888563 225 92 98.5 1 6 677 260 484 XCM68377.1 MAG: nonstructural polyprotein, partial [Picornavirales sp.] diamond 5424 261 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
30160264 30160264 PRJEB673_P_NODE_10352_length_176_cov_1.120567_g10003_i0 PRJEB673 10352 176 1.120567 1.97219792 Wilkie partiti-like virus 2 2010284 Viruses Viruses 46.6 6.6e-4   NR YP_009388578.1 2010284 g10003 i0 32.8 1.96022727272727 58 39 98.9 0 175 2 373 430 YP_009388578.1 RdRp [Wilkie partiti-like virus 2] diamond 345 46.6 1 Viruses               Wilkie partiti-like virus 2
30287308 30287308 PRJEB673_P_NODE_9452_length_196_cov_5.186335_g9103_i0 PRJEB673 9452 196 5.186335 10.1652166 Adintovirus bos4377 3115894 Viruses Viruses 63.5 4.78e-10   NR DBA50496.1 3115894 g9103 i0 51.6 0.979591836734694 64 31 98 0 194 3 123 186 DBA50496.1 MAG TPA_asm: Adintoc2 [Adintovirus bos4377] diamond 192 63.5 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
30855548 30855548 PRJEB673_P_NODE_8874_length_229_cov_1.201031_g8525_i0 PRJEB673 8874 229 1.201031 2.75036099 Pimephales minnow adintovirus 2609864 Viruses Viruses 74.3 5.33e-14   NR DAC81394.1 2609864 g8525 i0 55.3 0.995633187772926 76 34 99.6 0 228 1 58 133 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 228 74.3 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
31139565 31139565 PRJEB673_P_NODE_3515_length_532_cov_2.076459_g3194_i0 PRJEB673 3515 532 2.076459 11.04676188 Pimephales minnow adintovirus 2609864 Viruses Viruses 176 1.09e-50   NR DAC81401.1 2609864 g3194 i0 67.1 0.806390977443609 143 47 80.6 0 102 530 1 143 DAC81401.1 TPA_asm: integrase [Pimephales minnow adintovirus] diamond 429 176 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
31899034 31899034 PRJEB673_P_NODE_12357_length_154_cov_1.462185_g12008_i0 PRJEB673 12357 154 1.462185 2.2517649 Pimephales minnow adintovirus 2609864 Viruses Viruses 67 1.14e-11   NR DAC81394.1 2609864 g12008 i0 65.3 0.954545454545455 49 17 95.5 0 2 148 164 212 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 147 67 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
32752421 32752421 PRJEB673_P_NODE_13060_length_150_cov_1.034783_g12711_i0 PRJEB673 13060 150 1.034783 1.5521745 Dicistroviridae sp. 1955144 Viruses Viruses 41.2 0.0383   NR ULF99807.1 1955144 g12711 i0 40.8 0.98 49 25 98 1 4 150 437 481 ULF99807.1 MAG: putative replicase polyprotein, partial [Dicistroviridae sp.] diamond 147 41.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
32846794 32846794 PRJEB673_P_NODE_20_length_3473_cov_3.276905_g0_i1 PRJEB673 20 3473 3.276905 113.80691065 Ripucork virus 3130406 Viruses Viruses 96.3 4.54e-16   NR WZH59589.1 3130406 g0 i1 25 0.43276706017852 501 334 41.7 17 1379 2827 37 513 WZH59589.1 MAG: hypothetical protein [Ripucork virus] diamond 1503 96.3 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae   Ripucork virus
32878312 32878312 PRJEB673_P_NODE_11040_length_165_cov_3.907692_g10691_i0 PRJEB673 11040 165 3.907692 6.4476918 Pimephales minnow adintovirus 2609864 Viruses Viruses 52.4 7.05e-7   NR DAC81395.1 2609864 g10691 i0 62.3 0.963636363636364 53 20 96.4 0 161 3 1 53 DAC81395.1 TPA_asm: gasderminX [Pimephales minnow adintovirus] diamond 159 52.4 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;