contig_metadata
10 rows where bioproject = "PRJEB673", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3960990 | 3960990 | PRJEB673_P_NODE_11784_length_158_cov_1.813008_g11435_i0 | PRJEB673 | 11784 | 158 | 1.813008 | 2.86455264 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 267 | 4.2799999999999996e-67 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g11435 | i0 | 98.052 | 3.8987341772151902 | 154 | 2 | 97 | 1 | 5 | 158 | 512335 | 512183 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 616 | 267 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 10337968 | 10337968 | PRJEB673_P_NODE_4349_length_458_cov_2.449173_g4005_i0 | PRJEB673 | 4349 | 458 | 2.449173 | 11.21721234 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 172 | 4.32e-52 | NR | MCB0369869.1 | 2053517 | g4005 | i0 | 73.1 | 0.779475982532751 | 119 | 29 | 76 | 3 | 457 | 110 | 2 | 120 | MCB0369869.1 uL15 family ribosomal protein [Bdellovibrionales bacterium] | diamond | 357 | 172 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 12888519 | 12888519 | PRJEB673_P_NODE_6011_length_358_cov_1.603715_g5662_i0 | PRJEB673 | 6011 | 358 | 1.603715 | 5.7412997 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 96.3 | 3.06e-23 | NR | MCB0369390.1 | 2053517 | g5662 | i0 | 71 | 1.50837988826816 | 62 | 16 | 50.3 | 1 | 191 | 12 | 34 | 95 | MCB0369390.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 540 | 96.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 26653983 | 26653983 | PRJEB673_P_NODE_9421_length_197_cov_1.975309_g9072_i0 | PRJEB673 | 9421 | 197 | 1.975309 | 3.89135873 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 62 | 6.49e-10 | NR | MCB0370127.1 | 2053517 | g9072 | i0 | 92.9 | 0.426395939086294 | 28 | 2 | 42.6 | 0 | 86 | 3 | 38 | 65 | MCB0370127.1 40S ribosomal protein S14 [Bdellovibrionales bacterium] | diamond | 84 | 62 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28013465 | 28013465 | PRJEB673_P_NODE_12385_length_154_cov_1.336134_g12036_i0 | PRJEB673 | 12385 | 154 | 1.336134 | 2.05764636 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 65.5 | 3.06e-12 | NR | MCB0368228.1 | 2053517 | g12036 | i0 | 71.1 | 0.876623376623377 | 45 | 13 | 87.7 | 0 | 1 | 135 | 27 | 71 | MCB0368228.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 135 | 65.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28013467 | 28013467 | PRJEB673_P_NODE_2025_length_682_cov_9.432767_g1762_i0 | PRJEB673 | 2025 | 682 | 9.432767 | 64.33147094 | Bacteriovorax sp. | 2608087 | Bacteria | Bacteria | 79.3 | 4.13e-14 | NR | MBP9680184.1 | 2608087 | g1762 | i0 | 47.7 | 0.488269794721408 | 111 | 55 | 47.9 | 3 | 445 | 119 | 46 | 155 | MBP9680184.1 hypothetical protein [Bacteriovorax sp.] | diamond | 333 | 79.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax sp. | ||
| 29086936 | 29086936 | PRJEB673_P_NODE_11408_length_161_cov_2.190476_g11059_i0 | PRJEB673 | 11408 | 161 | 2.190476 | 3.52666636 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 86.7 | 5.26e-20 | NR | MCB0368309.1 | 2053517 | g11059 | i0 | 79.2 | 0.987577639751553 | 53 | 11 | 98.8 | 0 | 159 | 1 | 28 | 80 | MCB0368309.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 159 | 86.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30027062 | 30027062 | PRJEB673_P_NODE_11991_length_157_cov_1.098361_g11642_i0 | PRJEB673 | 11991 | 157 | 1.098361 | 1.72442677 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 64.3 | 8.13e-11 | NR | PIP89989.1 | 1973930 | g11642 | i0 | 52 | 7.49044585987261 | 50 | 24 | 95.5 | 0 | 154 | 5 | 73 | 122 | PIP89989.1 MAG: thioredoxin peroxidase [Bdellovibrionales bacterium CG22_combo_CG10-13_8_21_14_all_38_13] | diamond | 1176 | 64.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium CG22_combo_CG10-13_8_21_14_all_38_13 | ||||
| 30319037 | 30319037 | PRJEB673_P_NODE_6112_length_354_cov_2.507837_g5763_i0 | PRJEB673 | 6112 | 354 | 2.507837 | 8.87774298 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 102 | 6.19e-25 | NR | MCB0370127.1 | 2053517 | g5763 | i0 | 82.8 | 0.491525423728814 | 58 | 10 | 49.2 | 0 | 62 | 235 | 30 | 87 | MCB0370127.1 40S ribosomal protein S14 [Bdellovibrionales bacterium] | diamond | 174 | 102 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30697527 | 30697527 | PRJEB673_P_NODE_4594_length_436_cov_1.855362_g4247_i0 | PRJEB673 | 4594 | 436 | 1.855362 | 8.08937832 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 228 | 8.73e-74 | NR | MCB0369646.1 | 2053517 | g4247 | i0 | 73.5 | 1.03899082568807 | 151 | 33 | 99.1 | 1 | 433 | 2 | 6 | 156 | MCB0369646.1 50S ribosomal protein L22 [Bdellovibrionales bacterium] | diamond | 453 | 228 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;