RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB673", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJEB673 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5237469 5237469 PRJEB673_P_NODE_5065_length_402_cov_2.326975_g4716_i0 PRJEB673 5065 402 2.326975 9.3544395 Opisthokonta 33154 Fungi Fungi 72 2.39e-13   NR KNE66705.1 578462 g4716 i0 72.5 1.52985074626866 51 14 38.1 0 383 231 1 51 KNE66705.1 60S acidic ribosomal protein P2 [Allomyces macrogynus ATCC 38327] diamond 615 72.4 0.994475138121547 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
13748698 13748698 PRJEB673_P_NODE_4271_length_466_cov_2.628770_g3928_i0 PRJEB673 4271 466 2.62877 12.2500682 Opisthokonta 33154 Fungi Fungi 72 4.6e-13   NR KNE66705.1 578462 g3928 i0 72.5 1.31974248927039 51 14 32.8 0 447 295 1 51 KNE66705.1 60S acidic ribosomal protein P2 [Allomyces macrogynus ATCC 38327] diamond 615 72.4 0.994475138121547 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
27855376 27855376 PRJEB673_P_NODE_8365_length_283_cov_1.451613_g8016_i0 PRJEB673 8365 283 1.451613 4.10806479 Catenaria anguillulae PL171 765915 Fungi Fungi 71.6 9.49e-13   NR ORZ35735.1 765915 g8016 i0 53.7 1.36749116607774 67 26 65.7 1 2 187 153 219 ORZ35735.1 ribosomal protein S3 [Catenaria anguillulae PL171] diamond 387 71.6 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
32057189 32057189 PRJEB673_P_NODE_12138_length_156_cov_0.991736_g11789_i0 PRJEB673 12138 156 0.991736 1.54710816 Blastocladiella britannica 64508 Fungi Fungi 86.3 6.84e-20   NR KAI9216859.1 64508 g11789 i0 82.4 5.88461538461539 51 9 98.1 0 2 154 2 52 KAI9216859.1 ribosomal protein S9 [Blastocladiella britannica] diamond 918 86.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;