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contig_metadata

15 rows where bioproject = "PRJEB673" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 15 ✖

bioproject 1

  • PRJEB673 · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
134925 134925 PRJEB673_P_NODE_3841_length_506_cov_2.033970_g3511_i0 PRJEB673 3841 506 2.03397 10.2918882 Monoraphidium neglectum 145388 Plants Plants 169 4.71e-37   NTclustered gi|926787363|ref|XM_014046702.1| 145388 g3511 i0 83.889 4.91106719367589 180 25 35 4 58 235 870 693 Monoraphidium neglectum Calreticulin Flags: Precursor mRNA blastn 2485 169 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
7787295 7787295 PRJEB673_P_NODE_4327_length_460_cov_2.188235_g3984_i0 PRJEB673 4327 460 2.188235 10.065881 Eukaryota 2759 Plants Plants 223 2.87e-64   NR PRW60132.1 3076 g3984 i0 68.8 72.8086956521739 160 42 99.1 1 3 458 41 200 PRW60132.1 60S ribosomal L15 [Chlorella sorokiniana] diamond 33492 225 0.991111111111111 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
10338014 10338014 PRJEB673_P_NODE_9749_length_188_cov_1.751634_g9400_i0 PRJEB673 9749 188 1.751634 3.29307192 Eukaryota 2759 Plants Plants 88.2 1.74e-18   NR PRW44927.1 3076 g9400 i0 61.3 15.3829787234043 62 24 98.9 0 1 186 725 786 PRW44927.1 60S ribosomal L3 [Chlorella sorokiniana] diamond 2892 89 0.991011235955056 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
10338015 10338015 PRJEB673_P_NODE_9769_length_187_cov_3.355263_g9420_i0 PRJEB673 9769 187 3.355263 6.27434181 Chlamydomonas reinhardtii 3055 Plants Plants 58.4 3.44e-4   NTclustered gi|2082237163|ref|XM_043058766.1| 3055 g9420 i0 100 0.561497326203209 31 0 17 0 146 176 198 228 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g039250v5), mRNA blastn 105 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
14163276 14163276 PRJEB673_P_NODE_13052_length_150_cov_1.043478_g12703_i0 PRJEB673 13052 150 1.043478 1.565217 Chlorella variabilis 554065 Plants Plants 122 9.18e-24   NTclustered gi|552813385|ref|XM_005843877.1| 554065 g12703 i0 82.857 2.53333333333333 140 21 93 2 1 140 1233 1369 Chlorella variabilis hypothetical protein (CHLNCDRAFT_59785) mRNA, complete cds blastn 380 122 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
17573194 17573194 PRJEB673_P_NODE_12314_length_154_cov_2.210084_g11965_i0 PRJEB673 12314 154 2.210084 3.40352936 Eukaryota 2759 Plants Plants 110 7.39e-20   NTclustered gi|760450068|ref|XM_011403801.1| 3075 g11965 i0 90.361 55.5974025974026 83 8 54 0 1 83 322 404 Auxenochlorella protothecoides Peptidyl-prolyl cis-trans isomerase CYP18-4 partial mRNA blastn 8562 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
23086700 23086700 PRJEB673_P_NODE_3439_length_538_cov_1.347913_g3121_i0 PRJEB673 3439 538 1.347913 7.25177194 Eukaryota 2759 Plants Plants 239 3.01e-76   NR KAF5839439.1 3046 g3121 i0 65.4 78.8531598513011 179 61 99.8 1 538 2 76 253 KAF5839439.1 ribosoaml protein S2 [Dunaliella salina] diamond 42423 240 0.995833333333333 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
24360738 24360738 PRJEB673_P_NODE_6120_length_354_cov_1.645768_g5771_i0 PRJEB673 6120 354 1.645768 5.82601872 Monoraphidium neglectum 145388 Plants Plants 178 5.289999999999999e-40   NTclustered gi|926781811|ref|XM_014043926.1| 145388 g5771 i0 89.855 44.0988700564972 138 14 39 0 216 353 225 88 Monoraphidium neglectum peptidyl-prolyl cis-trans isomerase, cyclophilin-type mRNA blastn 15611 178 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
26781030 26781030 PRJEB673_P_NODE_10241_length_178_cov_1.118881_g9892_i0 PRJEB673 10241 178 1.118881 1.99160818 Chlamydomonas sp. UWO 241 1653778 Plants Plants 99.4 1.0399999999999997e-23   NR KAG1656054.1 1653778 g9892 i0 78.9 4.83707865168539 57 12 96.1 0 174 4 44 100 KAG1656054.1 hypothetical protein FOA52_004473 [Chlamydomonas sp. UWO 241] diamond 861 99.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
27191996 27191996 PRJEB673_P_NODE_10302_length_177_cov_1.049296_g9953_i0 PRJEB673 10302 177 1.049296 1.85725392 Chlamydomonas incerta 51695 Plants Plants 81.6 2.93e-16   NR KAG2439423.1 51695 g9953 i0 70.7 17.6949152542373 58 17 98.3 0 176 3 510 567 KAG2439423.1 hypothetical protein HXX76_004780 [Chlamydomonas incerta] diamond 3132 81.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
28107866 28107866 PRJEB673_P_NODE_13045_length_150_cov_1.043478_g12696_i0 PRJEB673 13045 150 1.043478 1.565217 Gonium pectorale 33097 Plants Plants 61.6 2.22e-9   NR KXZ50275.1 33097 g12696 i0 54.2 2.92 48 22 96 0 3 146 299 346 KXZ50275.1 hypothetical protein GPECTOR_17g914 [Gonium pectorale] diamond 438 61.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
28953562 28953562 PRJEB673_P_NODE_8528_length_265_cov_1.217391_g8179_i0 PRJEB673 8528 265 1.217391 3.22608615 Eukaryota 2759 Plants Plants 103 2.2699999999999994e-23   NR XP_011401541.1 3075 g8179 i0 62.1 7.6188679245283 87 33 98.5 0 265 5 403 489 XP_011401541.1 T-complex protein 1 subunit alpha [Auxenochlorella protothecoides] diamond 2019 103 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
29528949 29528949 PRJEB673_P_NODE_8390_length_280_cov_1.306122_g8041_i0 PRJEB673 8390 280 1.306122 3.6571416 Symbiochloris irregularis 706552 Plants Plants 119 3.53e-29   NR KAK9805450.1 706552 g8041 i0 71.7 4.92857142857143 92 25 98.6 1 278 3 386 476 KAK9805450.1 hypothetical protein WJX73_008571 [Symbiochloris irregularis] diamond 1380 119 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
29876270 29876270 PRJEB673_P_NODE_6971_length_328_cov_1.511945_g6622_i0 PRJEB673 6971 328 1.511945 4.9591796 Volvox carteri f. nagariensis 3068 Plants Plants 68.6 8.78e-11   NR XP_002951961.1 3068 g6622 i0 50 0.676829268292683 74 24 59.5 2 207 13 569 638 XP_002951961.1 cysteine protease [Volvox carteri f. nagariensis] diamond 222 68.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
30508049 30508049 PRJEB673_P_NODE_8493_length_269_cov_1.529915_g8144_i0 PRJEB673 8493 269 1.529915 4.11547135 [Myrmecia] bisecta 41462 Plants Plants 57 5.98e-8   NR KAK9808837.1 41462 g8144 i0 59 0.434944237918216 39 16 43.5 0 151 267 11 49 KAK9808837.1 hypothetical protein WJX72_004716 [[Myrmecia] bisecta] diamond 117 57 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;