contig_metadata
14 rows where bioproject = "PRJEB673" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2684951 | 2684951 | PRJEB673_P_NODE_10863_length_168_cov_1.203008_g10514_i0 | PRJEB673 | 10863 | 168 | 1.203008 | 2.02105344 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 255 | 1e-63 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g10514 | i0 | 94.083 | 158.380952380952 | 169 | 9 | 100 | 1 | 1 | 168 | 2003386 | 2003218 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 26608 | 255 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 5237506 | 5237506 | PRJEB673_P_NODE_9425_length_197_cov_1.716049_g9076_i0 | PRJEB673 | 9425 | 197 | 1.716049 | 3.38061653 | Gemmata massiliana | 1210884 | Bacteria | Bacteria | 303 | 4.27e-78 | NTclustered | gi|1804905141|emb|LR593886.1| | 1210884 | g9076 | i0 | 94.416 | 34.1269035532995 | 197 | 11 | 100 | 0 | 1 | 197 | 3634990 | 3634794 | Gemmata massiliana isolate Soil9 genome assembly, chromosome: 1 | blastn | 6723 | 303 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata massiliana | |
| 9062147 | 9062147 | PRJEB673_P_NODE_1228_length_850_cov_8.323926_g1019_i0 | PRJEB673 | 1228 | 850 | 8.323926 | 70.753371 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 1352 | 0 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g1019 | i0 | 96.569 | 279.321176470588 | 816 | 28 | 96 | 0 | 1 | 816 | 4717234 | 4716419 | Luteolibacter sp. SL250 chromosome | blastn | 237423 | 1352 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 10337986 | 10337986 | PRJEB673_P_NODE_6589_length_338_cov_2.917492_g6240_i0 | PRJEB673 | 6589 | 338 | 2.917492 | 9.86112296 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 508 | 1.58e-139 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g6240 | i0 | 93.787 | 102.062130177515 | 338 | 21 | 100 | 0 | 1 | 338 | 3261715 | 3261378 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 34497 | 508 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 18846973 | 18846973 | PRJEB673_P_NODE_5835_length_364_cov_5.939210_g5486_i0 | PRJEB673 | 5835 | 364 | 5.93921 | 21.6187244 | Verrucomicrobiales | 48461 | Bacteria | Bacteria | 468 | 2.89e-127 | NTclustered | gi|2647781590|dbj|AP024702.1| | 490095 | g5486 | i0 | 91.74 | 392.796703296703 | 339 | 24 | 93 | 4 | 1 | 337 | 775555 | 775891 | Haloferula helveola CN-1 DNA, complete genome | blastn | 142978 | 470 | 0.995744680851064 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Haloferula | Haloferula helveola | |
| 27160256 | 27160256 | PRJEB673_P_NODE_4862_length_415_cov_2.021053_g4514_i0 | PRJEB673 | 4862 | 415 | 2.021053 | 8.38736995 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 231 | 1.23e-75 | NR | MCP5470421.1 | 2047757 | g4514 | i0 | 81.5 | 0.975903614457831 | 135 | 25 | 97.6 | 0 | 413 | 9 | 24 | 158 | MCP5470421.1 hypothetical protein [Chlamydiales bacterium] | diamond | 405 | 231 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 27571201 | 27571201 | PRJEB673_P_NODE_12104_length_156_cov_1.322314_g11755_i0 | PRJEB673 | 12104 | 156 | 1.322314 | 2.06280984 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 60.5 | 6.49e-9 | NR | MDH4372957.1 | 2026799 | g11755 | i0 | 54.9 | 0.980769230769231 | 51 | 23 | 98.1 | 0 | 156 | 4 | 552 | 602 | MDH4372957.1 glycosyltransferase [Verrucomicrobiota bacterium] | diamond | 153 | 60.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30255612 | 30255612 | PRJEB673_P_NODE_4912_length_412_cov_1.920424_g4564_i0 | PRJEB673 | 4912 | 412 | 1.920424 | 7.91214688 | Simkania sp. | 34094 | Bacteria | Bacteria | 74.3 | 5.37e-13 | NR | MCB1084310.1 | 34094 | g4564 | i0 | 57.9 | 0.41504854368932 | 57 | 24 | 41.5 | 0 | 410 | 240 | 114 | 170 | MCB1084310.1 hypothetical protein [Simkania sp.] | diamond | 171 | 74.3 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 30539614 | 30539614 | PRJEB673_P_NODE_4733_length_425_cov_2.184615_g4385_i0 | PRJEB673 | 4733 | 425 | 2.184615 | 9.28461375 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 159 | 8.089999999999999e-47 | NR | MCP5470420.1 | 2047757 | g4385 | i0 | 75.2 | 0.910588235294118 | 129 | 30 | 91.1 | 1 | 423 | 37 | 29 | 155 | MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] | diamond | 387 | 159 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 31417369 | 31417369 | PRJEB673_P_NODE_9216_length_206_cov_1.391813_g8867_i0 | PRJEB673 | 9216 | 206 | 1.391813 | 2.86713478 | Bacteria | 2 | Bacteria | Bacteria | 55.5 | 7.25e-7 | NR | HVS10494.1 | 2026780 | g8867 | i0 | 51 | 2.05339805825243 | 49 | 24 | 71.4 | 0 | 4 | 150 | 91 | 139 | HVS10494.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Planctomycetota bacterium] | diamond | 423 | 55.8 | 0.99462365591397806 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31796733 | 31796733 | PRJEB673_P_NODE_11317_length_162_cov_1.574803_g10968_i0 | PRJEB673 | 11317 | 162 | 1.574803 | 2.55118086 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 80.1 | 7.81e-16 | NR | WP_146661715.1 | 1936003 | g10968 | i0 | 69.6 | 17.2037037037037 | 46 | 14 | 85.2 | 0 | 21 | 158 | 109 | 154 | WP_146661715.1 adenosylhomocysteinase [Anaerohalosphaera lusitana] | diamond | 2787 | 80.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Sedimentisphaerales | Anaerohalosphaeraceae | Anaerohalosphaera | Anaerohalosphaera lusitana | |
| 31962250 | 31962250 | PRJEB673_P_NODE_12418_length_154_cov_1.008403_g12069_i0 | PRJEB673 | 12418 | 154 | 1.008403 | 1.55294062 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 79 | 1.22e-15 | NR | WP_322282923.1 | 1965333 | g12069 | i0 | 75.5 | 5.68831168831169 | 49 | 12 | 95.5 | 0 | 3 | 149 | 265 | 313 | WP_322282923.1 alkene reductase [Prosthecobacter sp.] | diamond | 876 | 79 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 32057191 | 32057191 | PRJEB673_P_NODE_3698_length_518_cov_1.418219_g3371_i0 | PRJEB673 | 3698 | 518 | 1.418219 | 7.34637442 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 131 | 3.0999999999999996e-32 | NR | MBL9134577.1 | 2026801 | g3371 | i0 | 76.5 | 4.22200772200772 | 81 | 19 | 46.9 | 0 | 274 | 516 | 363 | 443 | MBL9134577.1 phosphoenolpyruvate carboxykinase (ATP) [Verrucomicrobiales bacterium] | diamond | 2187 | 131 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 32088822 | 32088822 | PRJEB673_P_NODE_1118_length_885_cov_2.136471_g916_i0 | PRJEB673 | 1118 | 885 | 2.136471 | 18.90776835 | PVC group bacterium | 2056642 | Bacteria | Bacteria | 63.2 | 1.16e-8 | NR | MCP4648866.1 | 2056642 | g916 | i0 | 45 | 0.338983050847458 | 100 | 55 | 33.9 | 0 | 419 | 718 | 1 | 100 | MCP4648866.1 hypothetical protein [PVC group bacterium] | diamond | 300 | 63.2 | 1 | Bacteria | PVC group | Pseudomonadati | PVC group bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;