RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB673", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJEB673 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17986481 17986481 PRJEB673_P_NODE_3295_length_550_cov_1.935922_g2979_i0 PRJEB673 3295 550 1.935922 10.647571 Prymnesium parvum 97485 Haptophyta other_Eukaryota 142 2.92e-38   NR KAL1515065.1 97485 g2979 i0 77.5 2.74909090909091 89 20 48.5 0 269 3 135 223 KAL1515065.1 hypothetical protein AB1Y20_004130 [Prymnesium parvum] diamond 1512 142 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
30445010 30445010 PRJEB673_P_NODE_10973_length_166_cov_1.832061_g10624_i0 PRJEB673 10973 166 1.832061 3.04122126 Pavlovales sp. CCMP2436 483367 Haptophyta other_Eukaryota 94 6.32e-22   NR KAJ1628737.1 483367 g10624 i0 77.4 2.85542168674699 53 12 95.8 0 164 6 83 135 KAJ1628737.1 ribosomal protein S2, flavodoxin-like domain-containing protein [Pavlovales sp. CCMP2436] diamond 474 94 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales     Pavlovales sp. CCMP2436

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;