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contig_metadata

22 rows where bioproject = "PRJEB673" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 22 ✖

bioproject 1

  • PRJEB673 · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2685017 2685017 PRJEB673_P_NODE_5863_length_363_cov_11.865854_g5514_i0 PRJEB673 5863 363 11.865854 43.07305002 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 204 8.98e-48   NTclustered gi|470521486|ref|XM_004353672.1| 1257118 g5514 i0 82.479 64.8732782369146 234 39 64 2 92 324 99 331 Acanthamoeba castellanii str. Neff Histone H4, putative (ACA1_376700), partial mRNA blastn 23549 204 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7787252 7787252 PRJEB673_P_NODE_1407_length_798_cov_2.159895_g1186_i0 PRJEB673 1407 798 2.159895 17.2359621 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 239 9.12e-71   NR BAF75925.1 5791 g1186 i0 71.2 11.1052631578947 153 44 57.5 0 459 1 268 420 BAF75925.1 heat shock protein 90, partial [Physarum polycephalum] diamond 8862 239 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
7787322 7787322 PRJEB673_P_NODE_767_length_1039_cov_3.438247_g599_i0 PRJEB673 767 1039 3.438247 35.72338633 Heterostelium album 2086695 Evosea other_Eukaryota 1125 0   NTclustered gi|1160564476|ref|XM_020583030.1| 670386 g599 i0 86.667 97.6313763233879 1020 130 98 6 23 1039 1185 169 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 101439 1125 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
9062123 9062123 PRJEB673_P_NODE_10048_length_182_cov_1.231293_g9699_i0 PRJEB673 10048 182 1.231293 2.24095326 Heterostelium album 2086695 Evosea other_Eukaryota 113 7e-21   NTclustered gi|1160557226|ref|XM_020574438.1| 670386 g9699 i0 80.986 2.04395604395604 142 27 78 0 2 143 106 247 Polysphondylium pallidum PN500 annexin VII (nxnA), partial mRNA blastn 372 113 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
11198607 11198607 PRJEB673_P_NODE_5569_length_376_cov_1.337243_g5220_i0 PRJEB673 5569 376 1.337243 5.02803368 Eumycetozoa 142796 Evosea other_Eukaryota 104 3.39e-26   NR KYQ89188.1 361077 g5220 i0 51.5 2.52925531914894 101 49 80.6 0 20 322 3 103 KYQ89188.1 40S ribosomal protein S26 [Tieghemostelium lacteum] diamond 951 105 0.990476190476191 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
17986513 17986513 PRJEB673_P_NODE_5675_length_372_cov_1.379822_g5326_i0 PRJEB673 5675 372 1.379822 5.13293784 Ripella decalvata 2047822 Discosea other_Eukaryota 593 4.689999999999999e-165   NTclustered gi|1269228392|gb|MF683517.1| 2047822 g5326 i0 95.479 93.0940860215054 376 10 100 7 1 372 1577 1205 Ripella decalvata clone 23.3.1 18S ribosomal RNA gene, partial sequence blastn 34631 593 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
20121793 20121793 PRJEB673_P_NODE_8936_length_223_cov_1.377660_g8587_i0 PRJEB673 8936 223 1.37766 3.0721818 Vannella 95228 Discosea other_Eukaryota 385 1.72e-102   NTclustered gi|399764213|gb|JQ271724.1| 1215628 g8587 i0 97.758 87 223 5 100 0 1 223 362 140 Vannella sp. ACN1 18S ribosomal RNA gene, partial sequence blastn 19401 385 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ACN1
21811724 21811724 PRJEB673_P_NODE_8778_length_237_cov_1.742574_g8429_i0 PRJEB673 8778 237 1.742574 4.12990038 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 132 4.82e-35   NR XP_635383.1 352472 g8429 i0 76.9 6.05063291139241 78 18 98.7 0 1 234 305 382 XP_635383.1 S-adenosylmethionine synthetase [Dictyostelium discoideum AX4] diamond 1434 133 0.992481203007519 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
23086776 23086776 PRJEB673_P_NODE_999_length_929_cov_2.130872_g808_i0 PRJEB673 999 929 2.130872 19.79580088 Stemonitopsis subcaespitosa 1048528 Evosea other_Eukaryota 878 0   NTclustered gi|426281760|gb|JX681133.1| 1048528 g808 i0 84.943 88.8815931108719 870 128 93 1 58 924 6 875 Stemonitopsis subcaespitosa actin gene, partial cds blastn 82571 878 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Stemonitopsis Stemonitopsis subcaespitosa
23947821 23947821 PRJEB673_P_NODE_5359_length_385_cov_2.320000_g5010_i0 PRJEB673 5359 385 2.32 8.932 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 250 1.21e-61   NTclustered gi|471205339|ref|XM_004259391.1| 370355 g5010 i0 78.59 99.8363636363636 383 78 99 4 5 385 998 618 Entamoeba invadens IP1 actin, putative (EIN_370100) mRNA, complete cds blastn 38437 252 0.992063492063492 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
26590619 26590619 PRJEB673_P_NODE_6501_length_341_cov_1.751634_g6152_i0 PRJEB673 6501 341 1.751634 5.97307194 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 73.2 6.73e-14   NR 1F2K_A 5755 g6152 i0 75.6 0.395894428152493 45 11 39.6 0 205 339 62 106 1F2K_A Chain A, PROFILIN II [Acanthamoeba castellanii] diamond 135 73.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27286962 27286962 PRJEB673_P_NODE_2563_length_615_cov_4.634483_g2269_i0 PRJEB673 2563 615 4.634483 28.50207045 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 45.4 0.0114   NR XP_004351526.1 1257118 g2269 i0 44.9 0.239024390243902 49 27 23.9 0 560 414 26 74 XP_004351526.1 selT/selW/selH selenoprotein domain containing protein [Acanthamoeba castellanii str. Neff] diamond 147 45.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27571207 27571207 PRJEB673_P_NODE_9124_length_211_cov_1.352273_g8775_i0 PRJEB673 9124 211 1.352273 2.85329603 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 86.3 8.04e-18   NR PRP80070.1 1890364 g8775 i0 49.3 0.981042654028436 69 35 98.1 0 208 2 275 343 PRP80070.1 glutathione S-transferase domain-containing protein [Planoprotostelium fungivorum] diamond 207 86.3 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27697911 27697911 PRJEB673_P_NODE_10864_length_168_cov_1.195489_g10515_i0 PRJEB673 10864 168 1.195489 2.00842152 Cavenderia fasciculata 261658 Evosea other_Eukaryota 89.4 5.04e-19   NR XP_004350624.1 261658 g10515 i0 77.8 7.71428571428571 54 12 96.4 0 166 5 443 496 XP_004350624.1 elongation factor 2 [Cavenderia fasciculata] diamond 1296 89.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
27918458 27918458 PRJEB673_P_NODE_4785_length_421_cov_2.152850_g4437_i0 PRJEB673 4785 421 2.15285 9.0634985 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 146 5.539999999999999e-42   NR KYR02504.1 361077 g4437 i0 52.9 1.9667458432304 138 65 98.3 0 418 5 1 138 KYR02504.1 actin binding protein [Tieghemostelium lacteum] diamond 828 146 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
28928935 28928935 PRJEB673_P_NODE_8908_length_225_cov_3.126316_g8559_i0 PRJEB673 8908 225 3.126316 7.034211 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 48.5 4.58e-5   NR XP_639052.1 352472 g8559 i0 45.3 1.72 64 35 85.3 0 196 5 1 64 XP_639052.1 ribosomal acidic phosphoprotein P2 [Dictyostelium discoideum AX4] diamond 387 48.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
28992386 28992386 PRJEB673_P_NODE_8948_length_222_cov_0.983957_g8599_i0 PRJEB673 8948 222 0.983957 2.18438454 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 87 5.24e-19   NR KYQ94221.1 361077 g8599 i0 54.3 0.945945945945946 70 30 94.6 1 212 3 1 68 KYQ94221.1 hypothetical protein DLAC_04516 [Tieghemostelium lacteum] diamond 210 87 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
29497244 29497244 PRJEB673_P_NODE_10070_length_181_cov_1.643836_g9721_i0 PRJEB673 10070 181 1.643836 2.97534316 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 76.3 1.41e-14   NR XP_004356622.1 1257118 g9721 i0 59.3 0.977900552486188 59 24 97.8 0 179 3 69 127 XP_004356622.1 mitochondrial phosphate transporter, putative [Acanthamoeba castellanii str. Neff] diamond 177 76.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30382092 30382092 PRJEB673_P_NODE_4073_length_485_cov_2.051111_g3739_i0 PRJEB673 4073 485 2.051111 9.94788835 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 47.8 8.41e-4   NR XP_004351526.1 1257118 g3739 i0 46.9 0.303092783505155 49 26 30.3 0 458 312 26 74 XP_004351526.1 selT/selW/selH selenoprotein domain containing protein [Acanthamoeba castellanii str. Neff] diamond 147 47.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30760905 30760905 PRJEB673_P_NODE_8754_length_239_cov_19.549020_g8405_i0 PRJEB673 8754 239 19.54902 46.7221578 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 48.1 4.54e-4   NR XP_004255455.1 370355 g8405 i0 29.5 1.93305439330544 78 44 94.1 2 226 2 772 841 XP_004255455.1 protein serine/threonine kinase, putative [Entamoeba invadens IP1] diamond 462 48.1 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
31645796 31645796 PRJEB673_P_NODE_12977_length_150_cov_1.391304_g12628_i0 PRJEB673 12977 150 1.391304 2.086956 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 61.6 2.21e-9   NR PRP76100.1 1890364 g12628 i0 55.6 4.54 45 20 90 0 6 140 221 265 PRP76100.1 4-hydroxyphenylpyruvate dioxygenase-like [Planoprotostelium fungivorum] diamond 681 61.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31986592 31986592 PRJEB673_P_NODE_11778_length_158_cov_1.951220_g11429_i0 PRJEB673 11778 158 1.95122 3.0829276 Dictyosteliaceae 2058185 Evosea other_Eukaryota 97.8 3.1499999999999995e-23   NR XP_003287730.1 5786 g11429 i0 80.8 59.2405063291139 52 10 98.7 0 156 1 144 195 XP_003287730.1 40S ribosomal protein S2 [Dictyostelium purpureum] diamond 9360 97.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;