RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB66218" and tax_phylum = "Tubulinea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB66218 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1405270 1405270 PRJEB66218_P_NODE_118922_length_276_cov_1.813953_g116493_i0 PRJEB66218 118922 276 1.813953 5.00651028 Nolandella sp. LAK-2012 1260117 Tubulinea other_Eukaryota 220 6.57e-53   NTclustered gi|421976359|gb|JQ519496.1| 1260117 g116493 i0 83.475 12.9311594202899 236 39 86 0 5 240 537 772 Nolandella sp. LAK-2012 elongation factor 2 alpha gene, partial cds blastn 3569 220 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Nolandella Nolandella sp. LAK-2012
31038258 31038258 PRJEB66218_P_NODE_103015_length_301_cov_1.625000_g100587_i0 PRJEB66218 103015 301 1.625 4.89125 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 121 2.41e-30   NR AAD37351.1 5775 g100587 i0 62.2 3.84717607973422 98 35 95.7 1 298 11 98 195 AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus] diamond 1158 121 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;