RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB66218", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB66218 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16296628 16296628 PRJEB66218_P_NODE_102253_length_302_cov_3.112033_g99825_i0 PRJEB66218 102253 302 3.112033 9.39833966 root 1 Root_unresolved Root_unresolved 536 6.369999999999999e-148   NTclustered gi|82618470|gb|DQ278118.1| 29281 g99825 i0 98.675 103.41059602649 302 4 100 0 1 302 1026 1327 Uncultured crenarchaeote clone OdenA-100ii 16S ribosomal RNA gene, partial sequence; and 16S-23S ribosomal RNA intergenic spacer, complete sequence blastn 31230 536 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
23946749 23946749 PRJEB66218_P_NODE_152439_length_240_cov_1.044693_g150010_i0 PRJEB66218 152439 240 1.044693 2.5072632 Archaea 2157 Archaea Archaea 435 1.83e-117   NTclustered gi|62946369|gb|DQ004716.1| 29281 g150010 i0 99.167 99.9875 240 2 100 0 1 240 451 212 Uncultured crenarchaeote isolate SSCP band Bo64-16-04 16S ribosomal RNA gene, partial sequence blastn 23997 438 0.993150684931507 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;