RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB66218", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB66218 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1408678 1408678 PRJEB66218_P_NODE_68502_length_389_cov_15.015244_g66078_i0 PRJEB66218 68502 389 15.015244 58.40929916 Chrocomolt virus 3129476 Viruses Viruses 553 8.359999999999996e-153   NTclustered gi|2717317674|gb|PP171924.1| 3129476 g66078 i0 94.215 5.426735218509 363 20 93 1 28 389 4400 4038 MAG: Chrocomolt virus isolate CC1B_k141_48525 genomic sequence blastn 2111 553 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales     Chrocomolt virus
19258074 19258074 PRJEB66218_P_NODE_217696_length_207_cov_0.890411_g215266_i0 PRJEB66218 217696 207 0.890411 1.84315077 Bromovirus BMV 3427622 Viruses Viruses 383 5.65e-102   NTclustered gi|176121034|ref|NC_002028.2| 12302 g215266 i0 100 97.2850241545894 207 0 100 0 1 207 1859 2065 Brome mosaic virus RNA 3, complete sequence blastn 20138 383 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Bromovirus Bromovirus BMV

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;