RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB66218" and tax_phylum = "Candidatus Peregrinibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 6 ✖

tax_clade 1

bioproject 1

  • PRJEB66218 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7787068 7787068 PRJEB66218_P_NODE_93167_length_320_cov_2.011583_g90739_i0 PRJEB66218 93167 320 2.011583 6.4370656 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 244 4.61e-60   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g90739 i0 86.222 5.265625 225 31 70 0 96 320 813659 813883 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 1685 244 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
15435419 15435419 PRJEB66218_P_NODE_248193_length_190_cov_2.015504_g245761_i0 PRJEB66218 248193 190 2.015504 3.8294576 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 176 9.28e-40   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g245761 i0 83.77 5.05789473684211 191 25 98 4 4 190 813312 813500 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 961 176 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
26780936 26780936 PRJEB66218_P_NODE_177901_length_222_cov_1.614907_g175471_i0 PRJEB66218 177901 222 1.614907 3.58509354 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 53.5 8.8e-7   NR MDR0651297.1 2053688 g175471 i0 40 0.878378378378378 65 38 86.5 1 6 197 71 135 MDR0651297.1 hypothetical protein [Candidatus Peribacteria bacterium] diamond 195 53.5 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
27286805 27286805 PRJEB66218_P_NODE_12023_length_1235_cov_1.918228_g10429_i0 PRJEB66218 12023 1235 1.918228 23.6901158 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 62 1.14e-7   NR MDR0651297.1 2053688 g10429 i0 44.7 0.184615384615385 76 38 18.5 3 594 367 64 135 MDR0651297.1 hypothetical protein [Candidatus Peribacteria bacterium] diamond 228 62 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
27445152 27445152 PRJEB66218_P_NODE_208783_length_209_cov_0.878378_g206353_i0 PRJEB66218 208783 209 0.878378 1.83581002 Candidatus Peregrinibacteria bacterium 2030811 Bacteria Bacteria 46.6 8.18e-4   NR MDO8648715.1 2030811 g206353 i0 37.7 0.875598086124402 61 38 87.6 0 1 183 159 219 MDO8648715.1 hypothetical protein [Candidatus Peregrinibacteria bacterium] diamond 183 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium
29300621 29300621 PRJEB66218_P_NODE_130289_length_261_cov_4.940000_g127860_i0 PRJEB66218 130289 261 4.94 12.8934 Pseudomonadati 3379134 Bacteria Bacteria 59.3 1.97e-8   NR MDR0651219.1 2053688 g127860 i0 52.6 2.03448275862069 57 26 65.5 1 89 259 58 113 MDR0651219.1 hypothetical protein [Candidatus Peribacteria bacterium] diamond 531 59.7 0.993299832495812 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;