RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB66218" and tax_phylum = "Candidatus Deferrimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Deferrimicrobiota · 2 ✖

bioproject 1

  • PRJEB66218 · 2 ✖

analysis 1

tax_kingdom 0

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29055235 29055235 PRJEB66218_P_NODE_159208_length_235_cov_1.120690_g156778_i0 PRJEB66218 159208 235 1.12069 2.6336215 Candidatus Deferrimicrobium sp. 3060586 Bacteria Bacteria 70.5 5.69e-12   NR HEX2720560.1 3060586 g156778 i0 53.3 8.75744680851064 75 35 95.7 0 234 10 202 276 HEX2720560.1 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase [Candidatus Deferrimicrobium sp.] diamond 2058 70.5 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae Candidatus Deferrimicrobium Candidatus Deferrimicrobium sp.
31835471 31835471 PRJEB66218_P_NODE_204157_length_210_cov_0.872483_g201727_i0 PRJEB66218 204157 210 0.872483 1.8322143 Candidatus Deferrimicrobium sp. 3060586 Bacteria Bacteria 72.4 5.53e-13   NR HZL82619.1 3060586 g201727 i0 53.7 2.85714285714286 67 31 95.7 0 203 3 47 113 HZL82619.1 GDP-mannose 4,6-dehydratase [Candidatus Deferrimicrobium sp.] diamond 600 72.4 1 Bacteria     Candidatus Deferrimicrobiota Candidatus Deferrimicrobia Candidatus Deferrimicrobiales Candidatus Deferrimicrobiaceae Candidatus Deferrimicrobium Candidatus Deferrimicrobium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;