RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB66218", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Synergistota · 3 ✖

tax_kingdom 1

  • Thermotogati · 3 ✖

bioproject 1

  • PRJEB66218 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23083006 23083006 PRJEB66218_P_NODE_134019_length_257_cov_1.989796_g131590_i0 PRJEB66218 134019 257 1.989796 5.11377572 Fretibacterium fastidiosum 651822 Bacteria Bacteria 54.7 0.006   NTclustered gi|2869663113|emb|OZ209244.1| 651822 g131590 i0 96.875 0.249027237354086 32 1 12 0 216 247 2075083 2075052 Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 blastn 64 54.7 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium Fretibacterium fastidiosum
24360413 24360413 PRJEB66218_P_NODE_89220_length_329_cov_2.395522_g86793_i0 PRJEB66218 89220 329 2.395522 7.88126738 Synergistales bacterium 2268201 Bacteria Bacteria 191 6.29e-44   NTclustered gi|2621703689|emb|OY762654.1| 2268201 g86793 i0 81.377 68.4133738601824 247 35 73 10 5 245 237516 237275 MAG: Synergistales bacterium isolate e2a2af2a-30b9-47e3-8e03-f1be080e1666 genome assembly, chromosome: 1 blastn 22508 191 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium
29332201 29332201 PRJEB66218_P_NODE_21629_length_834_cov_1.327296_g19513_i0 PRJEB66218 21629 834 1.327296 11.06964864 Bacteria 2 Bacteria Bacteria 93.2 4.42e-18   NR MDR0616474.1 2053624 g19513 i0 31.3 4.33812949640288 243 125 83.1 6 728 36 45 257 MDR0616474.1 purine-nucleoside phosphorylase [Synergistaceae bacterium] diamond 3618 93.2 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;