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contig_metadata

9 rows where bioproject = "PRJEB66218", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 9 ✖

tax_kingdom 1

  • Bacillati · 9 ✖

bioproject 1

  • PRJEB66218 · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1407375 1407375 PRJEB66218_P_NODE_242142_length_201_cov_4.642857_g239711_i0 PRJEB66218 242142 201 4.642857 9.33214257 Candidatus Hepatoplasma vulgare 3132032 Bacteria Bacteria 82.4 2.23e-11   NTclustered gi|2416256354|dbj|AP027131.1| 3132032 g239711 i0 88.406 3.54726368159204 69 6 34 2 10 77 478404 478471 MAG: Candidatus Hepatoplasma vulgare Av-JP DNA, complete genome blastn 713 82.4 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Candidatus Hepatoplasmataceae Candidatus Hepatoplasma Candidatus Hepatoplasma vulgare
2270269 2270269 PRJEB66218_P_NODE_76422_length_363_cov_11.937086_g73996_i0 PRJEB66218 76422 363 11.937086 43.33162218 Mycoplasma 2093 Bacteria Bacteria 67.6 1.23e-6   NTclustered gi|2294785939|gb|CP103424.1| 51364 g73996 i0 97.5 10.5730027548209 40 0 11 1 4 42 73047 73086 Mycoplasma cottewii strain VIS chromosome, complete genome blastn 3838 67.6 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma cottewii
15433453 15433453 PRJEB66218_P_NODE_132133_length_259_cov_2.373737_g129704_i0 PRJEB66218 132133 259 2.373737 6.14797883 Spiroplasma endosymbiont of Melieria omissa 3139324 Bacteria Bacteria 54.7 0.007   NTclustered gi|2719904899|emb|OZ035012.1| 3139324 g129704 i0 100 0.22007722007722 29 0 11 0 57 85 1304158 1304130 Spiroplasma endosymbiont of Melieria omissa isolate 7b93cfef-5182-4d29-b531-169777273f43 genome assembly, chromosome: 1 blastn 57 54.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Spiroplasmataceae Spiroplasma Spiroplasma endosymbiont of Melieria omissa
21807516 21807516 PRJEB66218_P_NODE_120558_length_274_cov_1.384977_g118129_i0 PRJEB66218 120558 274 1.384977 3.79483698 Mesomycoplasma ovipneumoniae 29562 Bacteria Bacteria 52.8 0.025   NTclustered gi|2582038664|gb|CP134944.1| 29562 g118129 i0 100 0.102189781021898 28 0 10 0 176 203 642778 642805 Mesomycoplasma ovipneumoniae strain MoS3261N22A chromosome, complete genome blastn 28 52.8 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma ovipneumoniae
24360573 24360573 PRJEB66218_P_NODE_96060_length_314_cov_1.841897_g93632_i0 PRJEB66218 96060 314 1.841897 5.78355658 Candidatus Tyloplasma litorale 3132031 Bacteria Bacteria 52.8 0.029   NTclustered gi|2413215879|dbj|AP027078.1| 3132031 g93632 i0 100 0.089171974522293 28 0 9 0 58 85 209769 209742 MAG: Candidatus Tyloplasma litorale Fukuoka2020 DNA, complete genome blastn 28 52.8 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Candidatus Hepatoplasmataceae Candidatus Tyloplasma Candidatus Tyloplasma litorale
28486896 28486896 PRJEB66218_P_NODE_241167_length_202_cov_0.921986_g238736_i0 PRJEB66218 241167 202 0.921986 1.86241172 Acholeplasma granularum 264635 Bacteria Bacteria 54.7 1.19e-6   NR WP_025725131.1 264635 g238736 i0 51.1 0.698019801980198 47 23 69.8 0 143 3 233 279 WP_025725131.1 ribosome small subunit-dependent GTPase A [Acholeplasma granularum] diamond 141 54.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae Acholeplasma Acholeplasma granularum
30287133 30287133 PRJEB66218_P_NODE_116092_length_280_cov_1.794521_g113663_i0 PRJEB66218 116092 280 1.794521 5.0246588 Acholeplasmatales bacterium 2053494 Bacteria Bacteria 84.7 4.47e-17   NR MBR4496985.1 2053494 g113663 i0 46.6 3.71785714285714 88 45 92.1 1 258 1 139 226 MBR4496985.1 annexin [Acholeplasmatales bacterium] diamond 1041 84.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales     Acholeplasmatales bacterium
31993783 31993783 PRJEB66218_P_NODE_133218_length_258_cov_1.700508_g130789_i0 PRJEB66218 133218 258 1.700508 4.38731064 Mollicutes bacterium 37628 Bacteria Bacteria 46.6 0.00105   NR NLL44599.1 37628 g130789 i0 42.1 1.55813953488372 76 43 87.2 1 29 253 2 77 NLL44599.1 translation initiation factor IF-3 [Mollicutes bacterium] diamond 402 46.6 1 Bacteria   Bacillati Mycoplasmatota Mollicutes       Mollicutes bacterium
32500326 32500326 PRJEB66218_P_NODE_213059_length_208_cov_0.884354_g210629_i0 PRJEB66218 213059 208 0.884354 1.83945632 Mycoplasmatota bacterium 2231116 Bacteria Bacteria 42 0.0464   NR QWB99420.1 2231116 g210629 i0 35.2 1.02403846153846 71 42 98.1 2 207 4 122 191 QWB99420.1 DUF5011 domain-containing protein [Mycoplasmatota bacterium] diamond 213 42 1 Bacteria   Bacillati Mycoplasmatota         Mycoplasmatota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;