RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB66218", tax_clade = "FCB group" and tax_phylum = "Candidatus Zixiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Zixiibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJEB66218 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21807758 21807758 PRJEB66218_P_NODE_132658_length_259_cov_1.191919_g130229_i0 PRJEB66218 132658 259 1.191919 3.08707021 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 76.6 4.84e-15   NR UCD63702.1 2053527 g130229 i0 60.7 0.706563706563707 61 23 70.7 1 57 239 2 61 UCD63702.1 MAG: superoxide dismutase [Fe] [Candidatus Zixiibacteriota bacterium] diamond 183 76.6 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
28265534 28265534 PRJEB66218_P_NODE_114306_length_283_cov_1.121622_g111877_i0 PRJEB66218 114306 283 1.121622 3.17419026 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 45.8 0.00483   NR MBI5869229.1 2053527 g111877 i0 33.3 0.636042402826855 60 39 63.6 1 265 86 396 454 MBI5869229.1 Nramp family divalent metal transporter [Candidatus Zixiibacteriota bacterium] diamond 180 45.8 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
29552964 29552964 PRJEB66218_P_NODE_75810_length_365_cov_3.680921_g73384_i0 PRJEB66218 75810 365 3.680921 13.43536165 Pseudomonadati 3379134 Bacteria Bacteria 66.6 4.39e-10   NR OGC91547.1 1802787 g73384 i0 39.5 3.96164383561644 114 63 91.2 4 10 342 92 202 OGC91547.1 MAG: hypothetical protein A2W25_03655 [candidate division Zixibacteria bacterium RBG_16_53_22] diamond 1446 66.6 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         candidate division Zixibacteria bacterium RBG_16_53_22

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;