RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJEB66218", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 5 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 5 ✖

bioproject 1

  • PRJEB66218 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9060761 9060761 PRJEB66218_P_NODE_4488_length_2196_cov_7.190632_g3773_i0 PRJEB66218 4488 2196 7.190632 157.90627872 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 451 6.13e-150   NR MCX5769312.1 2030809 g3773 i0 70.8 0.435792349726776 319 93 43.6 0 1003 1959 26 344 MCX5769312.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 957 451 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
27318702 27318702 PRJEB66218_P_NODE_90623_length_326_cov_1.471698_g88196_i0 PRJEB66218 90623 326 1.471698 4.79773548 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 113 1.93e-26   NR MBI5091111.1 2030809 g88196 i0 58 3.19325153374233 81 34 74.5 0 61 303 649 729 MBI5091111.1 HEAT repeat domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 1041 113 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28392140 28392140 PRJEB66218_P_NODE_57826_length_435_cov_2.644385_g55406_i0 PRJEB66218 57826 435 2.644385 11.50307475 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 47.4 0.00621   NR MCC6142333.1 2030809 g55406 i0 32.9 0.986206896551724 143 89 97.2 3 2 424 230 367 MCC6142333.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 429 47.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28448312 28448312 PRJEB66218_P_NODE_99906_length_307_cov_1.304878_g97478_i0 PRJEB66218 99906 307 1.304878 4.00597546 Bacteria 2 Bacteria Bacteria 121 1.24e-32   NR HNT86665.1 2030809 g97478 i0 55.9 2.97068403908795 102 43 98.7 2 305 3 62 162 HNT86665.1 TlpA disulfide reductase family protein [Candidatus Hydrogenedentota bacterium] diamond 912 121 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
29812864 29812864 PRJEB66218_P_NODE_73131_length_374_cov_1.246006_g70706_i0 PRJEB66218 73131 374 1.246006 4.66006244 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 148 4.28e-39   NR MDK1022452.1 2030809 g70706 i0 56.1 2.95989304812834 123 54 98.7 0 372 4 355 477 MDK1022452.1 oxalyl-CoA decarboxylase [Candidatus Hydrogenedentota bacterium] diamond 1107 148 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;