RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB66218" and tax_clade = "Adomaviruses"

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tax_superkingdom 1

tax_clade 1

  • Adomaviruses · 1 ✖

bioproject 1

  • PRJEB66218 · 1 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3958322 3958322 PRJEB66218_P_NODE_19964_length_881_cov_5.519512_g17904_i0 PRJEB66218 19964 881 5.519512 48.62690072 Leatherback sea turtle adomavirus 2707294 Viruses Viruses 78.7 1.47e-9   NTclustered gi|1821957979|tpg|BK012039.1| 2707294 g17904 i0 90 2.77412031782066 60 6 7 0 161 220 5953 6012 TPA_asm: Leatherback sea turtle adomavirus isolate 5093, complete genome blastn 2444 78.7 1 Viruses Adomaviruses             Leatherback sea turtle adomavirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;