contig_metadata
10 rows where bioproject = "PRJEB6584" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25933687 | 25933687 | PRJEB6584o_S_NODE_81212_length_151_cov_1.353448_g81104_i0 | PRJEB6584 | 81212 | 151 | 1.353448 | 2.04370648 | Syntrophotalea carbinolica DSM 238 | 19 | Bacteria | Bacteria | 69.4 | 1.22e-7 | NTclustered | gi|90823168|gb|CP000142.2| | 338963 | g81104 | i0 | 93.478 | 4.59602649006623 | 46 | 3 | 30 | 0 | 36 | 81 | 897263 | 897218 | Pelobacter carbinolicus DSM 2380, complete genome | blastn | 694 | 69.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Syntrophotaleaceae | Syntrophotalea | Syntrophotalea carbinolica | ||
| 26160288 | 26160288 | PRJEB6584d_S_NODE_13173_length_174_cov_1.568345_g13105_i0 | PRJEB6584 | 13173 | 174 | 1.568345 | 2.7289203 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 100 | 5.15e-17 | NTclustered | gi|2447237393|gb|CP087952.1| | 933262 | g13105 | i0 | 81.746 | 132.994252873563 | 126 | 18 | 71 | 4 | 52 | 174 | 2911766 | 2911889 | Desulfosarcina sp. BuS5 chromosome, complete genome | blastn | 23141 | 100 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfosarcinaceae | Desulfosarcina | Desulfosarcina sp. BuS5 | ||
| 26341542 | 26341542 | PRJEB6584o_S_NODE_58311_length_163_cov_0.937500_g58203_i0 | PRJEB6584 | 58311 | 163 | 0.9375 | 1.528125 | Desulfovibrio aminophilus | 81425 | Bacteria | Bacteria | 108 | 2.86e-19 | NTclustered | gi|2908463109|gb|CP168306.1| | 81425 | g58203 | i0 | 79.012 | 5.13496932515337 | 162 | 31 | 99 | 3 | 1 | 161 | 2517199 | 2517358 | MAG: Desulfovibrio aminophilus isolate Co chromosome, complete genome | blastn | 837 | 108 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio aminophilus | ||
| 26477169 | 26477169 | PRJEB6584o_S_NODE_17872_length_212_cov_2.000000_g17764_i0 | PRJEB6584 | 17872 | 212 | 2 | 4.24 | Desulfovibrio piger | 901 | Bacteria | Bacteria | 243 | 1.03e-59 | NTclustered | gi|1102127722|emb|LT630450.1| | 901 | g17764 | i0 | 87.264 | 62.0990566037736 | 212 | 27 | 100 | 0 | 1 | 212 | 982926 | 982715 | Desulfovibrio piger isolate FI11049 genome assembly, chromosome: I | blastn | 13165 | 243 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio piger | ||
| 32929315 | 32929315 | PRJEB6584o_S_NODE_14225_length_234_cov_2.246231_g14117_i0 | PRJEB6584 | 14225 | 234 | 2.246231 | 5.25618054 | Smithellaceae bacterium | 2964540 | Bacteria | Bacteria | 45.4 | 6.05e-4 | NR | HOC61279.1 | 2964540 | g14117 | i0 | 33.3 | 0.730769230769231 | 57 | 37 | 71.8 | 1 | 183 | 16 | 10 | 66 | HOC61279.1 hypothetical protein [Smithellaceae bacterium] | diamond | 171 | 45.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Smithellaceae | Smithellaceae bacterium | |||
| 32974515 | 32974515 | PRJEB6584e_S_NODE_3146_length_169_cov_5.149254_g3131_i0 | PRJEB6584 | 3146 | 169 | 5.149254 | 8.70223926 | root | 1 | Root_unresolved | Root_unresolved | 45.8 | 0.0011 | NR | HIP82064.1 | 65555 | g3131 | i0 | 52.9 | 3.62130177514793 | 34 | 16 | 60.4 | 0 | 104 | 3 | 133 | 166 | HIP82064.1 reverse transcriptase-like protein [Desulfocapsa sulfexigens] | diamond | 612 | 45.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfocapsaceae | Desulfocapsa | Desulfocapsa sulfexigens | ||
| 32998008 | 32998008 | PRJEB6584o_S_NODE_7203_length_315_cov_4.017857_g7095_i0 | PRJEB6584 | 7203 | 315 | 4.017857 | 12.65624955 | Geobacter argillaceus | 345631 | Bacteria | Bacteria | 86.7 | 9.44e-18 | NR | WP_145026094.1 | 345631 | g7095 | i0 | 44.1 | 0.971428571428571 | 102 | 57 | 97.1 | 0 | 7 | 312 | 157 | 258 | WP_145026094.1 hypothetical protein [Geobacter argillaceus] | diamond | 306 | 86.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter argillaceus | ||
| 33014650 | 33014650 | PRJEB6584o_S_NODE_12964_length_244_cov_3.736842_g12856_i0 | PRJEB6584 | 12964 | 244 | 3.736842 | 9.11789448 | Desulfobacterales bacterium RIFOXYA12_FULL_46_15 | 1797914 | Bacteria | Bacteria | 70.5 | 1.37e-12 | NR | OGR26158.1 | 1797914 | g12856 | i0 | 53.6 | 0.848360655737705 | 69 | 32 | 84.8 | 0 | 36 | 242 | 93 | 161 | OGR26158.1 MAG: hypothetical protein A2277_08190 [Desulfobacterales bacterium RIFOXYA12_FULL_46_15] | diamond | 207 | 70.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium RIFOXYA12_FULL_46_15 | ||||
| 33025763 | 33025763 | PRJEB6584o_S_NODE_19492_length_204_cov_4.769231_g19384_i0 | PRJEB6584 | 19492 | 204 | 4.7692310000000004 | 9.72923124 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 46.2 | 0.00138 | NR | WP_027369199.1 | 873 | g19384 | i0 | 69 | 2.55882352941176 | 29 | 9 | 42.6 | 0 | 135 | 49 | 11 | 39 | WP_027369199.1 EcoAI/FtnUII family type I restriction enzme subunit R [Desulfocurvibacter africanus] | diamond | 522 | 46.6 | 0.991416309012876 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfocurvibacter | Desulfocurvibacter africanus | ||
| 33127999 | 33127999 | PRJEB6584o_S_NODE_44727_length_169_cov_1.783582_g44619_i0 | PRJEB6584 | 44727 | 169 | 1.783582 | 3.01425358 | Desulfobacter | 2289 | Bacteria | Bacteria | 47.4 | 2.19e-4 | NR | WDP92862.1 | 2294 | g44619 | i0 | 50 | 2.00591715976331 | 56 | 26 | 97.6 | 2 | 4 | 168 | 21 | 75 | WDP92862.1 MAG: PEP-CTERM sorting domain-containing protein [Desulfobacter sp.] | diamond | 339 | 47.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacter | Desulfobacter sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;