RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB6584", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJEB6584 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26068028 26068028 PRJEB6584h_S_NODE_17741_length_182_cov_2.204082_g17679_i0 PRJEB6584 17741 182 2.204082 4.01142924 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 54.7 0.004   NTclustered gi|937513727|gb|CP012850.1| 1353260 g17679 i0 96.875 3.78571428571429 32 1 18 0 50 81 1320299 1320330 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 689 54.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
33134359 33134359 PRJEB6584o_S_NODE_29679_length_182_cov_2.061224_g29571_i0 PRJEB6584 29679 182 2.061224 3.75142768 Nitrosopumilus sp. 2024843 Archaea Archaea 51.6 1.19e-5   NR MDH5664822.1 2024843 g29571 i0 43.1 0.956043956043956 58 29 95.6 1 180 7 214 267 MDH5664822.1 hypothetical protein [Nitrosopumilus sp.] diamond 174 51.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;