RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB6584", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 1 ✖

tax_phylum 1

  • Kitrinoviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJEB6584 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25659803 25659803 PRJEB6584i_S_NODE_5666_length_171_cov_2.080882_g5654_i0 PRJEB6584 5666 171 2.080882 3.55830822 Hainan alphaflexivirus 2 2824425 Viruses Viruses 224 2.869999999999999e-54   NTclustered gi|2075444288|gb|MW897284.1| 2824425 g5654 i0 94.483 27.7368421052632 145 8 85 0 27 171 4604 4460 MAG: Hainan alphaflexivirus 2 isolate R87-k141_314575 replicase gene, partial cds; and NTP-binding helicase and hypothetical protein genes, complete cds blastn 4743 224 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae   Hainan alphaflexivirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;