RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where bioproject = "PRJEB6584" and tax_phylum = "Evosea"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 21 ✖

tax_clade 1

bioproject 1

  • PRJEB6584 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25660230 25660230 PRJEB6584o_S_NODE_1138_length_567_cov_1038.451128_g1073_i0 PRJEB6584 1138 567 1038.451128 5888.01789576 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 143 3.23e-29   NTclustered gi|66805304|ref|XM_631293.1| 352472 g1073 i0 85.135 9.14462081128748 148 13 40 5 125 263 222 75 Dictyostelium discoideum AX4 hypothetical protein (litaf) mRNA, complete cds blastn 5185 143 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
25661307 25661307 PRJEB6584o_S_NODE_7314_length_313_cov_5.647482_g7206_i0 PRJEB6584 7314 313 5.647482 17.67661866 Dictyostelium purpureum 5786 Evosea other_Eukaryota 161 4.66e-35   NTclustered gi|330842002|ref|XM_003292928.1| 5786 g7206 i0 82.587 16.2012779552716 201 17 63 8 40 237 55 240 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_95723), partial mRNA blastn 5071 161 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
25752497 25752497 PRJEB6584o_S_NODE_64538_length_160_cov_2.752000_g64430_i0 PRJEB6584 64538 160 2.752 4.4032 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 122 9.97e-24   NTclustered gi|161207|gb|M21500.1|SLMACT35 5791 g64430 i0 92.857 53.01875 84 6 53 0 77 160 1163 1080 P.polycephalum actin (Ppa35) mRNA, complete cds blastn 8483 122 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
25931988 25931988 PRJEB6584e_S_NODE_516_length_314_cov_42.430108_g501_i0 PRJEB6584 516 314 42.430108 133.23053912 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 147 7.869999999999999e-43   NR KAH3766405.1 1580589 g501 i0 84.7 227.37898089172 85 13 81.2 0 312 58 54 138 KAH3766405.1 histone H2B [Pelomyxa schiedti] diamond 71397 147 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
26067982 26067982 PRJEB6584e_S_NODE_725_length_281_cov_3.410569_g710_i0 PRJEB6584 725 281 3.410569 9.58369889 Dictyostelium intermedium 361076 Evosea other_Eukaryota 128 4.18e-25   NTclustered gi|2127860748|ref|NC_058586.1| 361076 g710 i0 77.99 2.92526690391459 209 42 74 4 26 232 573 367 Dictyostelium intermedium mitochondrion, complete genome blastn 822 128 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium intermedium
26160752 26160752 PRJEB6584o_S_NODE_853_length_625_cov_49.191525_g797_i0 PRJEB6584 853 625 49.191525 307.44703125 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 107 1.94e-23   NR PRP81227.1 1890364 g797 i0 71.4 2.328 70 20 33.6 0 625 416 318 387 PRP81227.1 S-adenosylmethionine synthetase [Planoprotostelium fungivorum] diamond 1455 107 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
26204365 26204365 PRJEB6584h_S_NODE_662_length_439_cov_4.269802_g602_i0 PRJEB6584 662 439 4.269802 18.74443078 Cavenderia fasciculata 261658 Evosea other_Eukaryota 52.8 0.042   NTclustered gi|470243001|ref|XM_004355171.1| 261658 g602 i0 100 0.0637813211845103 28 0 6 0 412 439 1653 1626 Cavenderia fasciculata putative protein serine/threonine kinase (dyrk1), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
26341852 26341852 PRJEB6584o_S_NODE_9287_length_284_cov_5.453815_g9179_i0 PRJEB6584 9287 284 5.453815 15.4888346 Heterostelium album PN5 2086695 Evosea other_Eukaryota 122 1.9699999999999998e-23   NTclustered gi|1160571044|ref|XM_020575016.1| 670386 g9179 i0 81.046 1 153 29 54 0 107 259 435 283 Polysphondylium pallidum PN500 40S ribosomal protein S14 (rps14), partial mRNA blastn 284 122 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
32980515 32980515 PRJEB6584e_S_NODE_1779_length_211_cov_1.272727_g1764_i0 PRJEB6584 1779 211 1.272727 2.68545397 Dictyostelium purpureum 5786 Evosea other_Eukaryota 62 3.82e-9   NR XP_003286736.1 5786 g1764 i0 51.7 3.21327014218009 58 27 82.5 1 3 176 648 704 XP_003286736.1 uncharacterized protein DICPUDRAFT_46984 [Dictyostelium purpureum] diamond 678 62 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32997910 32997910 PRJEB6584o_S_NODE_46371_length_168_cov_11.278195_g46263_i0 PRJEB6584 46371 168 11.278195 18.9473676 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 68.2 1.38e-11   NR KAH3731747.1 1580589 g46263 i0 70 2.08928571428571 40 12 71.4 0 152 33 389 428 KAH3731747.1 hypothetical protein Pelo_17418 [Pelomyxa schiedti] diamond 351 68.2 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
33014472 33014472 PRJEB6584e_S_NODE_180_length_426_cov_12.048593_g165_i0 PRJEB6584 180 426 12.048593 51.32700618 Dictyostelium purpureum 5786 Evosea other_Eukaryota 137 2.3e-35   NR XP_003291358.1 5786 g165 i0 53.1 1.00704225352113 143 60 99.3 2 425 3 316 453 XP_003291358.1 actin binding protein [Dictyostelium purpureum] diamond 429 137 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
33025722 33025722 PRJEB6584e_S_NODE_3036_length_172_cov_2.744526_g3021_i0 PRJEB6584 3036 172 2.744526 4.72058472 Acytosteliales 2058181 Evosea other_Eukaryota 45.1 0.00225   NR XP_004358193.1 261658 g3021 i0 74.1 0.976744186046512 27 7 47.1 0 171 91 532 558 XP_004358193.1 putative non-transporter ABC protein [Cavenderia fasciculata] diamond 168 45.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
33048541 33048541 PRJEB6584e_S_NODE_677_length_286_cov_12.960159_g662_i0 PRJEB6584 677 286 12.960159 37.06605474 Cavenderia fasciculata 261658 Evosea other_Eukaryota 129 1.08e-33   NR XP_004350709.1 261658 g662 i0 80.2 5.41258741258741 86 17 90.2 0 275 18 3 88 XP_004350709.1 uncharacterized protein DFA_11762 [Cavenderia fasciculata] diamond 1548 129 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
33048697 33048697 PRJEB6584o_S_NODE_11933_length_254_cov_5.091324_g11825_i0 PRJEB6584 11933 254 5.091324 12.93196296 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 49.7 6e-5   NR KAH3764251.1 1580589 g11825 i0 45.8 0.566929133858268 48 25 56.7 1 246 103 113 159 KAH3764251.1 hypothetical protein Pelo_3898 [Pelomyxa schiedti] diamond 144 49.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
33082723 33082723 PRJEB6584e_S_NODE_1230_length_240_cov_2.741463_g1215_i0 PRJEB6584 1230 240 2.741463 6.5795112 Physarum polycephalum 5791 Evosea other_Eukaryota 67 9.23e-11   NR AAA29967.1 5791 g1215 i0 45.3 0.9375 75 41 93.8 0 238 14 181 255 AAA29967.1 actin-binding protein [Physarum polycephalum] diamond 225 67 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
33082725 33082725 PRJEB6584e_S_NODE_2566_length_183_cov_2.317568_g2551_i0 PRJEB6584 2566 183 2.317568 4.24114944 Polysphondylium violaceum 133409 Evosea other_Eukaryota 90.1 3.4900000000000005e-21   NR KAF2075203.1 133409 g2551 i0 73.3 0.983606557377049 60 16 98.4 0 182 3 3 62 KAF2075203.1 hypothetical protein CYY_003508 [Polysphondylium violaceum] diamond 180 90.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
33082965 33082965 PRJEB6584o_S_NODE_17358_length_214_cov_3.675978_g17250_i0 PRJEB6584 17358 214 3.675978 7.86659292 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 42 0.0495   NR KAH3758012.1 1580589 g17250 i0 50 0.672897196261682 48 21 63.1 2 214 80 597 644 KAH3758012.1 cytohesin 1 [Pelomyxa schiedti] diamond 144 42 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
33099762 33099762 PRJEB6584e_S_NODE_2902_length_175_cov_2.250000_g2887_i0 PRJEB6584 2902 175 2.25 3.9375 Cavenderia fasciculata 261658 Evosea other_Eukaryota 88.2 1.44e-18   NR XP_004361176.1 261658 g2887 i0 70.7 7.85142857142857 58 17 99.4 0 2 175 183 240 XP_004361176.1 chaperonin containing TCP1 gamma subunit [Cavenderia fasciculata] diamond 1374 88.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
33150963 33150963 PRJEB6584e_S_NODE_1456_length_225_cov_1.452632_g1441_i0 PRJEB6584 1456 225 1.452632 3.268422 Cavenderia fasciculata 261658 Evosea other_Eukaryota 46.6 1.82e-4   NR XP_004361785.1 261658 g1441 i0 68.8 0.426666666666667 32 10 42.7 0 217 122 15 46 XP_004361785.1 actobindin [Cavenderia fasciculata] diamond 96 46.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
33162002 33162002 PRJEB6584e_S_NODE_1728_length_213_cov_1.955056_g1713_i0 PRJEB6584 1728 213 1.955056 4.16426928 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 46.6 9.65e-4   NR KYQ88739.1 361077 g1713 i0 40.6 1.94366197183099 69 37 95.8 2 211 8 138 203 KYQ88739.1 ubiquitin-conjugating enzyme E2 [Tieghemostelium lacteum] diamond 414 46.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
33167938 33167938 PRJEB6584e_S_NODE_1288_length_236_cov_4.228856_g1273_i0 PRJEB6584 1288 236 4.228856 9.98010016 Cavenderia deminutiva 361123 Evosea other_Eukaryota 94.7 1.67e-20   NR AOE43201.1 361123 g1273 i0 57 5.73305084745763 79 31 96.6 1 4 231 9 87 AOE43201.1 glutamate-cysteine ligase [Cavenderia deminutiva] diamond 1353 94.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia deminutiva

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;