contig_metadata
20 rows where bioproject = "PRJEB6584", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25525158 | 25525158 | PRJEB6584o_S_NODE_58193_length_163_cov_2.054688_g58085_i0 | PRJEB6584 | 58193 | 163 | 2.054688 | 3.34914144 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 189 | 9.92e-44 | NTclustered | gi|217038899|gb|EU810989.1| | 171953 | g58085 | i0 | 95 | 244.889570552147 | 120 | 6 | 74 | 0 | 44 | 163 | 1 | 120 | Uncultured Acidobacteria bacterium clone 01QD9 23S ribosomal RNA gene, partial sequence | blastn | 39917 | 189 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 25615859 | 25615859 | PRJEB6584i_S_NODE_121_length_490_cov_10.716484_g111_i0 | PRJEB6584 | 121 | 490 | 10.716484 | 52.5107716 | root | 1 | Root_unresolved | Root_unresolved | 324 | 9.17e-84 | NTclustered | gi|2874253679|emb|OY969113.1| | 171953 | g111 | i0 | 79.614 | 269.522448979592 | 466 | 84 | 94 | 11 | 1 | 463 | 3252453 | 3251996 | MAG: uncultured Acidobacteriota bacterium isolate MFD03399.bin.1.55 genome assembly, chromosome: 1 | blastn | 132066 | 324 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 25661407 | 25661407 | PRJEB6584o_S_NODE_82690_length_150_cov_1.773913_g82582_i0 | PRJEB6584 | 82690 | 150 | 1.773913 | 2.6608695 | Geothrix oryzae | 2927975 | Bacteria | Bacteria | 91.6 | 2.59e-14 | NTclustered | gi|2490888707|dbj|AP027079.1| | 2927975 | g82582 | i0 | 92.188 | 0.92 | 64 | 5 | 43 | 0 | 9 | 72 | 859159 | 859222 | Geothrix oryzae Red222 DNA, complete genome | blastn | 138 | 91.6 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix oryzae | ||
| 25796679 | 25796679 | PRJEB6584o_S_NODE_22443_length_195_cov_3.018750_g22335_i0 | PRJEB6584 | 22443 | 195 | 3.01875 | 5.8865625 | Thermoanaerobaculia bacterium | 2651171 | Bacteria | Bacteria | 113 | 7.620000000000001e-21 | NTclustered | gi|2893356059|emb|OZ220482.1| | 2651171 | g22335 | i0 | 80.645 | 4.34871794871795 | 155 | 22 | 77 | 6 | 41 | 191 | 2669967 | 2670117 | MAG: Thermoanaerobaculia bacterium isolate 1ba308f5-42e2-4878-81ff-2dc7ade272f8 genome assembly, chromosome: 1 | blastn | 848 | 113 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Thermoanaerobaculia | Thermoanaerobaculia bacterium | |||||
| 25888230 | 25888230 | PRJEB6584o_S_NODE_68963_length_158_cov_1.512195_g68855_i0 | PRJEB6584 | 68963 | 158 | 1.512195 | 2.3892681 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 161 | 2.08e-35 | NTclustered | gi|2874254049|emb|OY970373.1| | 171953 | g68855 | i0 | 90.323 | 22.7341772151899 | 124 | 10 | 78 | 2 | 36 | 158 | 3654003 | 3654125 | MAG: uncultured Acidobacteriota bacterium isolate MFD09368.bin.c.1 genome assembly, chromosome: 1 | blastn | 3592 | 161 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 25932101 | 25932101 | PRJEB6584i_S_NODE_11436_length_152_cov_1.478632_g11424_i0 | PRJEB6584 | 11436 | 152 | 1.478632 | 2.24752064 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 217 | 4.16e-52 | NTclustered | gi|217038899|gb|EU810989.1| | 171953 | g11424 | i0 | 96.899 | 117.671052631579 | 129 | 4 | 85 | 0 | 1 | 129 | 11 | 139 | Uncultured Acidobacteria bacterium clone 01QD9 23S ribosomal RNA gene, partial sequence | blastn | 17886 | 217 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 25932438 | 25932438 | PRJEB6584n_S_NODE_2076_length_163_cov_1.632812_g2070_i0 | PRJEB6584 | 2076 | 163 | 1.632812 | 2.66148356 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 148 | 1.68e-31 | NTclustered | gi|217038907|gb|EU810998.1| | 171953 | g2070 | i0 | 83.333 | 6.60736196319018 | 162 | 26 | 99 | 1 | 3 | 163 | 78 | 239 | Uncultured Acidobacteria bacterium clone 01QCK 23S ribosomal RNA gene, partial sequence | blastn | 1077 | 148 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 26023987 | 26023987 | PRJEB6584a_S_NODE_300_length_566_cov_50.367232_g289_i0 | PRJEB6584 | 300 | 566 | 50.367232 | 285.07853312 | root | 1 | Root_unresolved | Root_unresolved | 412 | 2.2199999999999998e-110 | NTclustered | gi|2874253950|emb|OY970275.1| | 171953 | g289 | i0 | 80.839 | 332.23851590106 | 548 | 86 | 96 | 19 | 26 | 566 | 4267070 | 4267605 | MAG: uncultured Acidobacteriota bacterium isolate MFD03399.bin.c.2 genome assembly, chromosome: 1 | blastn | 188047 | 416 | 0.990384615384615 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 26067985 | 26067985 | PRJEB6584e_S_NODE_845_length_272_cov_2.662447_g830_i0 | PRJEB6584 | 845 | 272 | 2.662447 | 7.24185584 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|2874253677|emb|OY969111.1| | 171953 | g830 | i0 | 100 | 0.102941176470588 | 28 | 0 | 10 | 0 | 104 | 131 | 4296236 | 4296209 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.3 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 26204719 | 26204719 | PRJEB6584n_S_NODE_3406_length_152_cov_3.521368_g3400_i0 | PRJEB6584 | 3406 | 152 | 3.521368 | 5.35247936 | uncultured Acidobacteriaceae bacterium | 194844 | Bacteria | Bacteria | 87.9 | 3.41e-13 | NTclustered | gi|2874254120|emb|OY970205.1| | 194844 | g3400 | i0 | 82.828 | 2.875 | 99 | 15 | 64 | 2 | 5 | 102 | 2480993 | 2481090 | MAG: uncultured Acidobacteriaceae bacterium isolate MFD02248.bin.1.24 genome assembly, chromosome: 1 | blastn | 437 | 87.9 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | uncultured Acidobacteriaceae bacterium | |||
| 26476398 | 26476398 | PRJEB6584h_S_NODE_11368_length_197_cov_3.438272_g11306_i0 | PRJEB6584 | 11368 | 197 | 3.438272 | 6.77339584 | Luteitalea pratensis | 1855912 | Bacteria | Bacteria | 117 | 5.96e-22 | NTclustered | gi|1016914409|gb|CP015136.1| | 1855912 | g11306 | i0 | 79.532 | 89.492385786802 | 171 | 29 | 84 | 4 | 1 | 166 | 653769 | 653600 | Luteitalea pratensis strain DSM 100886 chromosome, complete genome | blastn | 17630 | 117 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacteraceae | Luteitalea | Luteitalea pratensis | ||
| 26477331 | 26477331 | PRJEB6584o_S_NODE_23280_length_193_cov_1.886076_g23172_i0 | PRJEB6584 | 23280 | 193 | 1.886076 | 3.64012668 | Alloacidobacterium sp. | 2951999 | Bacteria | Bacteria | 66.2 | 9.51e-11 | NR | HMD21440.1 | 2951999 | g23172 | i0 | 51.8 | 3.48186528497409 | 56 | 27 | 87 | 0 | 193 | 26 | 290 | 345 | HMD21440.1 sensor histidine kinase [Alloacidobacterium sp.] | diamond | 672 | 66.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Alloacidobacterium | Alloacidobacterium sp. | ||
| 32963675 | 32963675 | PRJEB6584o_S_NODE_1666_length_504_cov_31.501066_g1582_i0 | PRJEB6584 | 1666 | 504 | 31.501066 | 158.76537264 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 66.6 | 5.48e-10 | NR | MEM7351477.1 | 1978231 | g1582 | i0 | 42.6 | 0.55952380952381 | 94 | 43 | 49.4 | 2 | 461 | 213 | 104 | 197 | MEM7351477.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 282 | 66.6 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 33014736 | 33014736 | PRJEB6584o_S_NODE_1756_length_495_cov_73.197826_g1671_i0 | PRJEB6584 | 1756 | 495 | 73.197826 | 362.3292387 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 66.6 | 5.08e-10 | NR | MEM7351477.1 | 1978231 | g1671 | i0 | 42.6 | 0.56969696969697 | 94 | 43 | 50.3 | 2 | 44 | 292 | 104 | 197 | MEM7351477.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 282 | 66.6 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 33014859 | 33014859 | PRJEB6584o_S_NODE_2860_length_428_cov_19.188295_g2754_i0 | PRJEB6584 | 2860 | 428 | 19.188295 | 82.1259026 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 67.4 | 1.42e-10 | NR | MEM7351477.1 | 1978231 | g2754 | i0 | 42.6 | 0.658878504672897 | 94 | 43 | 58.2 | 2 | 44 | 292 | 104 | 197 | MEM7351477.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 282 | 67.4 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 33025766 | 33025766 | PRJEB6584o_S_NODE_21052_length_199_cov_2.445122_g20944_i0 | PRJEB6584 | 21052 | 199 | 2.445122 | 4.86579278 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 48.5 | 1.93e-4 | NR | HEV7429049.1 | 2651171 | g20944 | i0 | 47.7 | 1.20603015075377 | 44 | 23 | 66.3 | 0 | 2 | 133 | 25 | 68 | HEV7429049.1 hypothetical protein [Thermoanaerobaculia bacterium] | diamond | 240 | 48.5 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Thermoanaerobaculia | Thermoanaerobaculia bacterium | |||||
| 33059656 | 33059656 | PRJEB6584d_S_NODE_4813_length_261_cov_3.880531_g4745_i0 | PRJEB6584 | 4813 | 261 | 3.880531 | 10.12818591 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 42.4 | 0.0118 | NR | MEP7212091.1 | 1978231 | g4745 | i0 | 44.6 | 2.03448275862069 | 56 | 23 | 55.2 | 2 | 197 | 54 | 2 | 57 | MEP7212091.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 531 | 42.4 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 33093879 | 33093879 | PRJEB6584a_S_NODE_4382_length_190_cov_2.393548_g4362_i0 | PRJEB6584 | 4382 | 190 | 2.393548 | 4.5477412 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 58.5 | 4.4e-8 | NR | MCI0490797.1 | 2052146 | g4362 | i0 | 51.9 | 1.64210526315789 | 52 | 25 | 82.1 | 0 | 33 | 188 | 26 | 77 | MCI0490797.1 hypothetical protein [Blastocatellia bacterium] | diamond | 312 | 58.9 | 0.99320882852292 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellia bacterium | |||||
| 33116888 | 33116888 | PRJEB6584l_S_NODE_24535_length_153_cov_2.059322_g24383_i0 | PRJEB6584 | 24535 | 153 | 2.059322 | 3.15076266 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 48.1 | 1.39e-4 | NR | HVL66240.1 | 2910147 | g24383 | i0 | 51.1 | 0.92156862745098 | 47 | 23 | 92.2 | 0 | 150 | 10 | 451 | 497 | HVL66240.1 tetratricopeptide repeat protein [Vicinamibacterales bacterium] | diamond | 141 | 48.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 33168200 | 33168200 | PRJEB6584o_S_NODE_16592_length_218_cov_5.846995_g16484_i0 | PRJEB6584 | 16592 | 218 | 5.846995 | 12.7464491 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 67 | 2.84e-12 | NR | MDQ7008654.1 | 1978231 | g16484 | i0 | 92.5 | 1.19724770642202 | 40 | 2 | 55 | 1 | 218 | 99 | 70 | 108 | MDQ7008654.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 261 | 67 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;