RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJEB6584" and tax_kingdom = "Nanobdellati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Nanobdellati · 3 ✖

bioproject 1

  • PRJEB6584 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32929129 32929129 PRJEB6584e_S_NODE_2953_length_174_cov_1.273381_g2938_i0 PRJEB6584 2953 174 1.273381 2.21568294 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 48.5 1.38e-4   NR MBI5065628.1 2026803 g2938 i0 41.1 2.72413793103448 56 33 96.6 0 168 1 42 97 MBI5065628.1 long-chain fatty acid--CoA ligase [Candidatus Woesearchaeota archaeon] diamond 474 48.5 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
32963688 32963688 PRJEB6584o_S_NODE_17394_length_214_cov_2.536313_g17286_i0 PRJEB6584 17394 214 2.536313 5.42770982 Nanobdellota archaeon 2026764 Archaea Archaea 49.7 8.17e-6   NR MCK4930450.1 2026764 g17286 i0 48.1 0.728971962616822 52 25 72.9 1 6 161 32 81 MCK4930450.1 TM2 domain-containing protein [Nanoarchaeota archaeon] diamond 156 49.7 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
33032107 33032107 PRJEB6584o_S_NODE_53284_length_165_cov_2.492308_g53176_i0 PRJEB6584 53284 165 2.492308 4.1123082 Nanobdellota archaeon 2026764 Archaea Archaea 77.8 7.91e-16   NR MBU2638726.1 2026764 g53176 i0 72.9 3.54545454545455 48 13 87.3 0 164 21 169 216 MBU2638726.1 HD domain-containing protein [Nanoarchaeota archaeon] diamond 585 77.8 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;