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contig_metadata

20 rows where bioproject = "PRJEB6584", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 20 ✖

tax_kingdom 1

  • Metazoa · 20 ✖

tax_clade 1

bioproject 1

  • PRJEB6584 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25524631 25524631 PRJEB6584o_S_NODE_20609_length_200_cov_11.654545_g20501_i0 PRJEB6584 20609 200 11.654545 23.30909 Strongyloides papillosus 174720 Nematoda Nematoda 52.8 0.017   NTclustered gi|690021421|emb|LM529123.1| 174720 g20501 i0 100 0.14 28 0 14 0 173 200 1682 1709 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0003434 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
25615950 25615950 PRJEB6584l_S_NODE_3457_length_298_cov_4.532319_g3305_i0 PRJEB6584 3457 298 4.532319 13.50631062 root 1 Root_unresolved Root_unresolved 62.1 4.6e-5   NTclustered gi|690021421|emb|LM529123.1| 174720 g3305 i0 100 11.6711409395973 33 0 11 0 266 298 1684 1716 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0003434 blastn 3478 62.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
25795794 25795794 PRJEB6584h_S_NODE_4003_length_265_cov_6.186957_g3941_i0 PRJEB6584 4003 265 6.186957 16.39543605 Metazoa 33208 Nematoda Nematoda 96.3 6.71e-21   NR KJH49928.1 29172 g3941 i0 81.1 10.6075471698113 53 10 60 0 244 86 490 542 KJH49928.1 glucose-6-phosphate isomerase [Dictyocaulus viviparus] diamond 2811 97.1 0.991761071060762 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Dictyocaulus Dictyocaulus viviparus
25796204 25796204 PRJEB6584o_S_NODE_10219_length_273_cov_2.495798_g10111_i0 PRJEB6584 10219 273 2.495798 6.81352854 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 81.3 1.34e-16   NR XP_042936859.1 6279 g10111 i0 75 124.230769230769 56 14 61.5 0 25 192 70 125 XP_042936859.1 histone H2A, putative [Brugia malayi] diamond 33915 82 0.991463414634146 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Brugia Brugia malayi
25887903 25887903 PRJEB6584i_S_NODE_7651_length_162_cov_1.212598_g7639_i0 PRJEB6584 7651 162 1.212598 1.96440876 Metazoa 33208 Nematoda Nematoda 119 1.31e-22   NTclustered gi|687865724|emb|LK927720.1| 6239 g7639 i0 91.765 54.1172839506173 85 7 52 0 78 162 116683 116599 Caenorhabditis elegans genome assembly C_elegans_Bristol_N2_v1_5_4 ,scaffold CELN2_scaffold0000166 blastn 8767 119 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
26204251 26204251 PRJEB6584d_S_NODE_3278_length_302_cov_4.779026_g3210_i0 PRJEB6584 3278 302 4.779026 14.43265852 Caenorhabditis elegans 6239 Nematoda Nematoda 178 4.45e-40   NTclustered gi|1972235554|ref|NM_001025879.7| 6239 g3210 i0 92.063 45.3841059602649 126 10 42 0 1 126 1187 1312 Caenorhabditis elegans Tubulin alpha-2 chain (tba-2), mRNA blastn 13706 178 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
26205526 26205526 PRJEB6584o_S_NODE_37038_length_174_cov_4.510791_g36930_i0 PRJEB6584 37038 174 4.510791 7.84877634 Caenorhabditis remanei 31234 Nematoda Nematoda 111 2.38e-20   NTclustered gi|2445387029|ref|XM_003106315.2| 31234 g36930 i0 85.714 13.632183908046 105 15 60 0 27 131 301 405 Caenorhabditis remanei uncharacterized protein (GCK72_020861), partial mRNA blastn 2372 111 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
26296112 26296112 PRJEB6584i_S_NODE_1974_length_229_cov_22.613402_g1962_i0 PRJEB6584 1974 229 22.613402 51.78469058 root 1 Root_unresolved Root_unresolved 58.4 4.39e-4   NTclustered gi|690021421|emb|LM529123.1| 174720 g1962 i0 100 14.471615720524 31 0 14 0 199 229 1684 1714 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0003434 blastn 3314 58.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
26340246 26340246 PRJEB6584k_S_NODE_4183_length_181_cov_2.746575_g4162_i0 PRJEB6584 4183 181 2.746575 4.97130075 Strongyloides papillosus 174720 Nematoda Nematoda 56.5 0.001   NTclustered gi|690021421|emb|LM529123.1| 174720 g4162 i0 97.059 0.187845303867403 34 0 19 1 1 34 1709 1677 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0003434 blastn 34 56.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
26568359 26568359 PRJEB6584o_S_NODE_2552_length_443_cov_14.551471_g2453_i0 PRJEB6584 2552 443 14.551471 64.46301653 Pristionchus 54125 Nematoda Nematoda 115 5.39e-21   NTclustered gi|150982243|gb|EF634710.1| 358043 g2453 i0 83.607 3.85553047404063 122 20 28 0 1 122 182 303 Pristionchus sp. 6 RS5101 large subunit ribosomal protein 30 (rpl-30) mRNA, partial cds blastn 1708 115 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus sp. 6 RS5101
32911926 32911926 PRJEB6584e_S_NODE_1969_length_204_cov_2.479290_g1954_i0 PRJEB6584 1969 204 2.47929 5.0577516 Caenorhabditis angaria 860376 Nematoda Nematoda 53.9 6.69e-7   NR CAI5440445.1 860376 g1954 i0 50.9 0.779411764705882 53 26 77.9 0 18 176 63 115 CAI5440445.1 unnamed protein product [Caenorhabditis angaria] diamond 159 53.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis angaria
32911942 32911942 PRJEB6584h_S_NODE_2833_length_296_cov_4.900383_g2771_i0 PRJEB6584 2833 296 4.900383 14.50513368 Strongyloides ratti 34506 Nematoda Nematoda 104 3.7e-24   NR XP_024501374.1 34506 g2771 i0 87.5 0.567567567567568 56 7 56.8 0 199 32 1 56 XP_024501374.1 Hsp90 co-chaperone Cdc37 [Strongyloides ratti] diamond 168 104 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
32912126 32912126 PRJEB6584o_S_NODE_14873_length_229_cov_2.371134_g14765_i0 PRJEB6584 14873 229 2.371134 5.42989686 Aphelenchoides avenae 70226 Nematoda Nematoda 112 2.6399999999999998e-28   NR KAH7708129.1 70226 g14765 i0 70.8 3.77292576419214 72 21 94.3 0 224 9 182 253 KAH7708129.1 40S ribosomal protein S4 [Aphelenchoides avenae] diamond 864 112 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
32929587 32929587 PRJEB6584o_S_NODE_44777_length_169_cov_1.194030_g44669_i0 PRJEB6584 44777 169 1.19403 2.0179107 Angiostrongylus cantonensis 6313 Nematoda Nematoda 41.6 0.0355   NR KAE9417123.1 6313 g44669 i0 44.2 0.923076923076923 52 28 92.3 1 166 11 277 327 KAE9417123.1 hypothetical protein Angca_008161, partial [Angiostrongylus cantonensis] diamond 156 41.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis
32940209 32940209 PRJEB6584h_S_NODE_2473_length_308_cov_3.058608_g2411_i0 PRJEB6584 2473 308 3.058608 9.42051264 Metazoa 33208 Nematoda Nematoda 149 5.77e-44   NR VDM28106.1 6265 g2411 i0 82.3 7.81168831168831 79 14 76.9 0 304 68 58 136 VDM28106.1 unnamed protein product [Toxocara canis] diamond 2406 149 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
32940249 32940249 PRJEB6584o_S_NODE_15937_length_222_cov_2.962567_g15829_i0 PRJEB6584 15937 222 2.962567 6.57689874 Opisthokonta 33154 Nematoda Nematoda 85.9 1.52e-18   NR VDP12526.1 6339 g15829 i0 69 4.7027027027027 58 18 78.4 0 220 47 152 209 VDP12526.1 unnamed protein product [Heligmosomoides polygyrus] diamond 1044 86.3 0.995365005793743 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Heligmosomoides Heligmosomoides polygyrus
33008548 33008548 PRJEB6584o_S_NODE_26283_length_187_cov_3.118421_g26175_i0 PRJEB6584 26283 187 3.118421 5.83144727 Metazoa 33208 Nematoda Nematoda 70.5 6.76e-14   NR VDL80748.1 27835 g26175 i0 66.7 6.85026737967914 45 13 70.6 2 171 40 58 101 VDL80748.1 unnamed protein product [Nippostrongylus brasiliensis] diamond 1281 71.2 0.990168539325843 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Nippostrongylus Nippostrongylus brasiliensis
33076714 33076714 PRJEB6584o_S_NODE_10269_length_272_cov_7.219409_g10161_i0 PRJEB6584 10269 272 7.219409 19.63679248 Metazoa 33208 Nematoda Nematoda 103 1.1699999999999997e-23   NR CAJ0582755.1 96644 g10161 i0 57.8 1.83088235294118 83 34 91.5 1 23 271 371 452 CAJ0582755.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 498 104 0.990384615384615 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
33110889 33110889 PRJEB6584o_S_NODE_76430_length_154_cov_5.705882_g76322_i0 PRJEB6584 76430 154 5.705882 8.78705828 Rhabditida 6236 Nematoda Nematoda 40.4 0.0296   NR VDO24364.1 6339 g76322 i0 54.5 1.28571428571429 33 15 64.3 0 101 3 63 95 VDO24364.1 unnamed protein product [Heligmosomoides polygyrus] diamond 198 40.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Heligmosomoides Heligmosomoides polygyrus
33167942 33167942 PRJEB6584e_S_NODE_2264_length_193_cov_1.405063_g2249_i0 PRJEB6584 2264 193 1.405063 2.71177159 Steinernema carpocapsae 34508 Nematoda Nematoda 45.1 0.00142   NR TKR92981.1 34508 g2249 i0 60 1.86528497409326 40 16 62.2 0 55 174 15 54 TKR92981.1 hypothetical protein L596_007523 [Steinernema carpocapsae] diamond 360 45.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;