RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB6584", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB6584 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33150955 33150955 PRJEB6584d_S_NODE_3352_length_300_cov_3.611321_g3284_i0 PRJEB6584 3352 300 3.611321 10.833963 Rozella allomycis CSF55 988480 Fungi Fungi 62 4.71e-9   NR EPZ36642.1 988480 g3284 i0 49.1 1.63 57 29 57 0 3 173 28 84 EPZ36642.1 High mobility group (HMG) box domain-containing protein [Rozella allomycis CSF55] diamond 489 62 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
33167979 33167979 PRJEB6584k_S_NODE_1832_length_221_cov_3.258065_g1811_i0 PRJEB6584 1832 221 3.258065 7.20032365 Rozella allomycis CSF55 988480 Fungi Fungi 47.8 3.58e-4   NR EPZ36642.1 988480 g1811 i0 76.7 0.407239819004525 30 7 40.7 0 221 132 42 71 EPZ36642.1 High mobility group (HMG) box domain-containing protein [Rozella allomycis CSF55] diamond 90 47.8 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;