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contig_metadata

20 rows where bioproject = "PRJEB6584", tax_kingdom = "Fungi" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 20 ✖

tax_kingdom 1

  • Fungi · 20 ✖

tax_clade 1

bioproject 1

  • PRJEB6584 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25524556 25524556 PRJEB6584o_S_NODE_18169_length_210_cov_154.194286_g18061_i0 PRJEB6584 18169 210 154.194286 323.8080006 Rodmanochytrium sp. 2750701 Fungi Fungi 95.3 3.02e-15   NTclustered gi|1866582804|gb|MT730979.1| 2750701 g18061 i0 93.75 25.8857142857143 64 2 30 1 1 64 4013 3952 Rodmanochytrium sp. isolate UM1564 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 5436 95.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Rodmanochytrium Rodmanochytrium sp.
25524618 25524618 PRJEB6584o_S_NODE_2017_length_477_cov_40.343891_g1926_i0 PRJEB6584 2017 477 40.343891 192.44036007 Synchytrium endobioticum 286115 Fungi Fungi 129 4e-34   NR TPX49355.1 286115 g1926 i0 58.6 4.33962264150943 99 41 62.3 0 19 315 104 202 TPX49355.1 hypothetical protein SeLEV6574_g01513 [Synchytrium endobioticum] diamond 2070 129 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium endobioticum
25659789 25659789 PRJEB6584h_S_NODE_9618_length_205_cov_1.629412_g9556_i0 PRJEB6584 9618 205 1.629412 3.3402946 Quaeritorhiza haematococci 2654861 Fungi Fungi 124 2.15e-34   NR KAJ3091593.1 2654861 g9556 i0 80.3 8.35609756097561 66 13 96.6 0 203 6 79 144 KAJ3091593.1 nucleoside diphosphate kinase [Quaeritorhiza haematococci] diamond 1713 124 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes   Quaeritorhizaceae Quaeritorhiza Quaeritorhiza haematococci
25797496 25797496 PRJEB6584o_S_NODE_8875_length_290_cov_1.925490_g8767_i0 PRJEB6584 8875 290 1.92549 5.583921 uncultured Chytridiomycota 175247 Fungi Fungi 272 1.89e-68   NTclustered gi|2465121831|gb|OQ687232.1| 175247 g8767 i0 88.839 76.4 224 22 77 3 57 280 218 438 Uncultured Chytridiomycota isolate UMPB-141 small subunit ribosomal RNA gene, partial sequence blastn 22156 272 1 Eukaryota Opisthokonta Fungi Chytridiomycota         uncultured Chytridiomycota
26341568 26341568 PRJEB6584o_S_NODE_6199_length_333_cov_18.154362_g6091_i0 PRJEB6584 6199 333 18.154362 60.45402546 Synchytrium microbalum 1806994 Fungi Fungi 68.9 2.31e-12   NR XP_031025983.1 1806994 g6091 i0 50.8 0.54954954954955 61 29 55 1 314 132 11 70 XP_031025983.1 uncharacterized protein SmJEL517_g02114 [Synchytrium microbalum] diamond 183 68.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
26478000 26478000 PRJEB6584o_S_NODE_77968_length_153_cov_2.533898_g77860_i0 PRJEB6584 77968 153 2.533898 3.87686394 Geranomyces variabilis 109894 Fungi Fungi 99.4 2.6299999999999998e-23   NR KAI8594001.1 109894 g77860 i0 94 1.96078431372549 50 3 98 0 2 151 284 333 KAI8594001.1 hypothetical protein BDZ88DRAFT_402276 [Geranomyces variabilis] diamond 300 99.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Geranomyces Geranomyces variabilis
32911947 32911947 PRJEB6584h_S_NODE_3913_length_267_cov_1.336207_g3851_i0 PRJEB6584 3913 267 1.336207 3.56767269 Chytridiales sp. JEL 2011832 Fungi Fungi 51.6 2.4e-5   NR KAJ3415299.1 2786947 g3851 i0 36.7 0.887640449438202 79 40 82 3 227 9 105 179 KAJ3415299.1 hypothetical protein HDV05_005169 [Chytridiales sp. JEL 0842] diamond 237 51.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales     Chytridiales sp. JEL 0842
32922992 32922992 PRJEB6584e_S_NODE_1561_length_220_cov_1.745946_g1546_i0 PRJEB6584 1561 220 1.745946 3.8410812 Chytriomycetaceae 1352827 Fungi Fungi 63.5 1.27e-9   NR KAJ3209199.1 109932 g1546 i0 51.9 4.28181818181818 52 25 70.9 0 220 65 164 215 KAJ3209199.1 Microtubule-associated protein, microtubule dynamics during spindle orientation, partial [Entophlyctis luteolus] diamond 942 63.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Entophlyctis Entophlyctis luteolus
32929153 32929153 PRJEB6584h_S_NODE_53393_length_163_cov_0.937500_g53331_i0 PRJEB6584 53393 163 0.9375 1.528125 Phlyctochytrium planicorne 261098 Fungi Fungi 47.8 9.77e-5   NR KAJ3109299.1 261098 g53331 i0 44.7 0.865030674846626 47 26 86.5 0 2 142 47 93 KAJ3109299.1 hypothetical protein HDU97_007793 [Phlyctochytrium planicorne] diamond 141 47.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium planicorne
32929155 32929155 PRJEB6584h_S_NODE_60609_length_161_cov_2.119048_g60547_i0 PRJEB6584 60609 161 2.119048 3.41166728 Globomyces pollinis-pini 382532 Fungi Fungi 65.1 7.69e-12   NR KAI8897850.1 382532 g60547 i0 76.5 0.633540372670807 34 8 63.4 0 58 159 9 42 KAI8897850.1 hypothetical protein BC833DRAFT_620851 [Globomyces pollinis-pini] diamond 102 65.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Globomycetaceae Globomyces Globomyces pollinis-pini
32929718 32929718 PRJEB6584o_S_NODE_81033_length_151_cov_2.379310_g80925_i0 PRJEB6584 81033 151 2.37931 3.5927581 Blyttiomyces helicus 388810 Fungi Fungi 45.1 0.00156   NR RKO89939.1 388810 g80925 i0 44.4 0.894039735099338 45 25 89.4 0 146 12 325 369 RKO89939.1 hypothetical protein BDK51DRAFT_36402 [Blyttiomyces helicus] diamond 135 45.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes     Blyttiomyces Blyttiomyces helicus
32946235 32946235 PRJEB6584e_S_NODE_210_length_409_cov_3.655080_g195_i0 PRJEB6584 210 409 3.65508 14.9492772 Neocallimastix lanati (nom. inval.) 2767002 Fungi Fungi 122 8.119999999999999e-31   NR KAG4101041.1 2767002 g195 i0 48.4 1.87775061124694 128 62 91 1 407 36 169 296 KAG4101041.1 hypothetical protein H8356DRAFT_986507 [Neocallimastix lanati (nom. inval.)] diamond 768 122 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix lanati (nom. inval.)
33031642 33031642 PRJEB6584h_S_NODE_836_length_414_cov_4.968338_g776_i0 PRJEB6584 836 414 4.968338 20.56891932 Thoreauomyces humboldtii 1396496 Fungi Fungi 59.3 4.01e-7   NR KAJ3023940.1 1396496 g776 i0 40.6 2.99275362318841 101 51 66.7 4 405 130 467 567 KAJ3023940.1 hypothetical protein HKX48_009148 [Thoreauomyces humboldtii] diamond 1239 59.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Thoreauomyces Thoreauomyces humboldtii
33082712 33082712 PRJEB6584d_S_NODE_14054_length_170_cov_1.614815_g13986_i0 PRJEB6584 14054 170 1.614815 2.7451855 Polychytrium aggregatum 110093 Fungi Fungi 47.4 9.53e-5   NR XP_052969068.1 110093 g13986 i0 56.8 1.94117647058824 37 16 65.3 0 2 112 91 127 XP_052969068.1 profilin [Polychytrium aggregatum] diamond 330 47.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
33099750 33099750 PRJEB6584d_S_NODE_13014_length_175_cov_1.142857_g12946_i0 PRJEB6584 13014 175 1.142857 1.99999975 Nowakowskiella sp. JEL 2012159 Fungi Fungi 70.1 4.96e-13   NR KAJ1557670.1 2732417 g12946 i0 70.2 1.61142857142857 47 14 80.6 0 174 34 140 186 KAJ1557670.1 40S ribosomal protein S9 [Nowakowskiella sp. JEL0078] diamond 282 70.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Nowakowskiellaceae Nowakowskiella Nowakowskiella sp. JEL0078
33117130 33117130 PRJEB6584o_S_NODE_22127_length_196_cov_1.086957_g22019_i0 PRJEB6584 22127 196 1.086957 2.13043572 Caulochytrium protostelioides 1555241 Fungi Fungi 65.5 1.9e-10   NR RKO99850.1 1555241 g22019 i0 68.4 0.581632653061224 38 12 58.2 0 192 79 401 438 RKO99850.1 hypothetical protein CXG81DRAFT_13942 [Caulochytrium protostelioides] diamond 114 65.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Caulochytriales Caulochytriaceae Caulochytrium Caulochytrium protostelioides
33127964 33127964 PRJEB6584o_S_NODE_11615_length_257_cov_270.788288_g11507_i0 PRJEB6584 11615 257 270.788288 695.92590016 Chytriomycetaceae 1352827 Fungi Fungi 55.5 7.78e-7   NR KAJ3348905.1 109932 g11507 i0 60 6.23346303501946 40 16 46.7 0 257 138 132 171 KAJ3348905.1 hypothetical protein HDU83_000961 [Entophlyctis luteolus] diamond 1602 55.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Entophlyctis Entophlyctis luteolus
33145069 33145069 PRJEB6584o_S_NODE_14063_length_235_cov_3.705000_g13955_i0 PRJEB6584 14063 235 3.705 8.70675 Fungi 4751 Fungi Fungi 45.4 4.48e-4   NR TPX55932.1 117820 g13955 i0 60 0.906382978723404 40 16 51.1 0 74 193 13 52 TPX55932.1 hypothetical protein SpCBS45565_g08475 [Spizellomyces sp. 'palustris'] diamond 213 45.8 0.991266375545852 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces sp. 'palustris'
33150967 33150967 PRJEB6584e_S_NODE_2848_length_176_cov_2.354610_g2833_i0 PRJEB6584 2848 176 2.35461 4.1441136 Irineochytrium annulatum 109884 Fungi Fungi 67.4 1.87e-12   NR KAJ3196669.1 109884 g2833 i0 59.6 5.82954545454545 57 23 97.2 0 174 4 77 133 KAJ3196669.1 60S ribosomal protein L32 [Irineochytrium annulatum] diamond 1026 67.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Irineochytrium Irineochytrium annulatum
33162004 33162004 PRJEB6584e_S_NODE_3592_length_162_cov_1.669291_g3577_i0 PRJEB6584 3592 162 1.669291 2.70425142 Fungi 4751 Fungi Fungi 64.7 2.15e-10   NR KAJ3153807.1 109884 g3577 i0 50 9.62962962962963 52 26 96.3 0 156 1 172 223 KAJ3153807.1 Type I HSP40 co-chaperone, partial [Irineochytrium annulatum] diamond 1560 64.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Irineochytrium Irineochytrium annulatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;