RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB6584", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 6 ✖

tax_kingdom 1

  • Fungi · 6 ✖

tax_clade 1

bioproject 1

  • PRJEB6584 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32912261 32912261 PRJEB6584o_S_NODE_25185_length_189_cov_2.461039_g25077_i0 PRJEB6584 25185 189 2.461039 4.65136371 Coelomomyces lativittatus 945690 Fungi Fungi 77.8 6.71e-15   NR KAJ1509542.1 945690 g25077 i0 66.7 0.857142857142857 54 18 85.7 0 3 164 351 404 KAJ1509542.1 hypothetical protein HMI56_006744 [Coelomomyces lativittatus] diamond 162 77.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
32923058 32923058 PRJEB6584o_S_NODE_27481_length_185_cov_4.440000_g27373_i0 PRJEB6584 27481 185 4.44 8.214 Fungi 4751 Fungi Fungi 59.3 4.73e-9   NR KAI9223064.1 64508 g27373 i0 67.6 3.55135135135135 37 12 60 0 180 70 120 156 KAI9223064.1 ribosomal protein L11 [Blastocladiella britannica] diamond 657 59.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
33065623 33065623 PRJEB6584e_S_NODE_3149_length_169_cov_3.850746_g3134_i0 PRJEB6584 3149 169 3.850746 6.50776074 Catenaria anguillulae PL171 765915 Fungi Fungi 50.4 2.7e-6   NR ORZ36260.1 765915 g3134 i0 72.2 0.63905325443787 36 10 63.9 0 142 35 9 44 ORZ36260.1 hypothetical protein BCR44DRAFT_74179, partial [Catenaria anguillulae PL171] diamond 108 50.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
33076772 33076772 PRJEB6584o_S_NODE_7933_length_304_cov_6.643123_g7825_i0 PRJEB6584 7933 304 6.643123 20.19509392 Opisthokonta 33154 Fungi Fungi 72.4 8.86e-14   NR KAI9222680.1 64508 g7825 i0 61.3 2.80263157894737 62 24 61.2 0 7 192 57 118 KAI9222680.1 translation protein SH3-like domain-containing protein, partial [Blastocladiella britannica] diamond 852 72.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
33082728 33082728 PRJEB6584e_S_NODE_4134_length_154_cov_1.680672_g4119_i0 PRJEB6584 4134 154 1.680672 2.58823488 Paraphysoderma sedebokerense 1500003 Fungi Fungi 66.6 1.57e-11   NR KAI9139519.1 1500003 g4119 i0 54.9 0.993506493506494 51 23 99.4 0 153 1 40 90 KAI9139519.1 ribosomal protein L19e-domain-containing protein [Paraphysoderma sedebokerense] diamond 153 66.6 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
33150994 33150994 PRJEB6584j_S_NODE_6616_length_191_cov_2.974359_g6587_i0 PRJEB6584 6616 191 2.974359 5.68102569 Coelomomyces lativittatus 945690 Fungi Fungi 59.3 3.29e-9   NR KAJ1509529.1 945690 g6587 i0 68.2 1.38219895287958 44 14 69.1 0 191 60 88 131 KAJ1509529.1 60S ribosomal protein L32 [Coelomomyces lativittatus] diamond 264 59.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;