RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJEB6584", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 7 ✖

tax_kingdom 1

  • Bacillati · 7 ✖

bioproject 1

  • PRJEB6584 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25525358 25525358 PRJEB6584o_S_NODE_7721_length_307_cov_6.996324_g7613_i0 PRJEB6584 7721 307 6.996324 21.47871468 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 222 2.06e-53   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g7613 i0 81.053 63.4983713355049 285 49 92 5 14 295 3494870 3494588 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 19494 222 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
26160666 26160666 PRJEB6584o_S_NODE_46533_length_168_cov_2.278195_g46425_i0 PRJEB6584 46533 168 2.278195 3.8273676 Bacillati 1783272 Bacteria Bacteria 69.4 1.4e-7   NTclustered gi|2621705867|emb|OY763929.1| 2026734 g46425 i0 93.478 3.4047619047619 46 3 27 0 1 46 1358128 1358173 MAG: Dehalococcoidia bacterium isolate b8c59f79-82fb-4549-ad1a-ab6c7f2c8c82 genome assembly, chromosome: 1 blastn 572 69.4 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
26204241 26204241 PRJEB6584d_S_NODE_14070_length_170_cov_1.296296_g14002_i0 PRJEB6584 14070 170 1.296296 2.2037032 uncultured Chloroflexota bacterium 166587 Bacteria Bacteria 171 3.7599999999999997e-38   NTclustered gi|374851800|dbj|AP011699.1| 166587 g14002 i0 86.709 26.8823529411765 158 15 91 6 8 162 20488 20642 Uncultured Chloroflexi bacterium DNA, fosmid clone: JFF019_G07 blastn 4570 171 1 Bacteria   Bacillati Chloroflexota         uncultured Chloroflexota bacterium
26205128 26205128 PRJEB6584o_S_NODE_1862_length_488_cov_2.781457_g1774_i0 PRJEB6584 1862 488 2.781457 13.57351016 uncultured Dehalococcoidia bacterium 498747 Bacteria Bacteria 67.6 1.7e-6   NTclustered gi|2531950174|emb|OY282494.1| 498747 g1774 i0 95.349 0.0881147540983607 43 1 9 1 148 190 2255642 2255601 MAG: uncultured Dehalococcoidia bacterium genome assembly, chromosome: 1 blastn 43 67.6 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       uncultured Dehalococcoidia bacterium
26341111 26341111 PRJEB6584o_S_NODE_25687_length_188_cov_4.790850_g25579_i0 PRJEB6584 25687 188 4.79085 9.006798 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 163 7.13e-36   NTclustered gi|2874253882|emb|OY969938.1| 1672391 g25579 i0 89.764 40.6914893617021 127 13 68 0 62 188 2065108 2065234 MAG: uncultured Chloroflexia bacterium isolate MFD02416.bin.c.1 genome assembly, chromosome: 1 blastn 7650 163 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
33059703 33059703 PRJEB6584o_S_NODE_15877_length_222_cov_8.454545_g15769_i0 PRJEB6584 15877 222 8.454545 18.7690899 Bacteria 2 Bacteria Bacteria 47 8.8e-4   NR MBT3338353.1 2052143 g15769 i0 63 1.25675675675676 46 15 60.8 2 209 75 417 461 MBT3338353.1 NAD(P)-binding protein [Anaerolineae bacterium] diamond 279 47 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
33065632 33065632 PRJEB6584h_S_NODE_18429_length_181_cov_2.760274_g18367_i0 PRJEB6584 18429 181 2.760274 4.99609594 Chloroflexota bacterium 2026724 Bacteria Bacteria 68.6 6.52e-12   NR MEW6180420.1 2026724 g18367 i0 71.8 1.93922651933702 39 11 64.6 0 2 118 229 267 MEW6180420.1 arsenite methyltransferase [Chloroflexota bacterium] diamond 351 68.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;