RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB6584", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB6584 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33008491 33008491 PRJEB6584e_S_NODE_3003_length_173_cov_1.869565_g2988_i0 PRJEB6584 3003 173 1.869565 3.23434745 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 45.8 4.82e-4   NR KAF4693414.1 32597 g2988 i0 55.6 1.8728323699422 36 16 62.4 0 6 113 100 135 KAF4693414.1 hypothetical protein FOZ63_008178, partial [Perkinsus olseni] diamond 324 45.8 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
33168417 33168417 PRJEB6584o_S_NODE_3752_length_394_cov_17.272981_g3644_i0 PRJEB6584 3752 394 17.272981 68.05554514 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 58.5 3.58e-7   NR TEB19254.1 2494336 g3644 i0 50 0.426395939086294 56 25 41.9 2 392 228 210 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 168 58.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;