RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB6584", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Stahliibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Stahliibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJEB6584 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33031860 33031860 PRJEB6584o_S_NODE_18492_length_209_cov_2.155172_g18384_i0 PRJEB6584 18492 209 2.155172 4.50430948 Candidatus Stahlbacteria bacterium 2528828 Bacteria Bacteria 47.8 4.01e-4   NR TEU00595.1 2528828 g18384 i0 55.9 0.947368421052632 34 15 48.8 0 198 97 404 437 TEU00595.1 MAG: saccharopine dehydrogenase [Candidatus Stahlbacteria bacterium] diamond 198 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Stahliibacteriota         Candidatus Stahliibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;